Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1125 ATGGATTACTGTGGAGGAAAGATTGGTGGAAGTGATCAAAGAGGTGGTGGGCCTTGTGGTGCTTGCAAGTTTTTGAGGAGAAAGTGTGTAAAAGGTTGCATATTTGCACCATATTTTGATTCAGACCAAGGAACGGTTCATTTTGCAGCAGTTCATAAAGTGTTTGGTGCTAGTAATGCCTCTAAGTTACTCATGCGTATTCCAGCTCATAAACGTCTTGATGCTGTTGTTACTCTTTGCTATGAAGCTCTTGCTAGGGCTAGAGACCCTGTTTATGGTTGTGTTGCTCACATCTTTGCACTTCAACAACAGGTTATGAGCTTGCAGGCAGAGTTAACCTATGTTCAAGCCACTCTTGCGACAATGCAGCGCCTCCCAATCTCACTCGCTCCATCGCTTCCAAACCCTCAAAGCTCTTCACCAAGTTTTCACTCCTCCTCGGATCACGTGGGAACAAATGCAGACATGCACAGTGCCTCTAACATGTCCATGCATTTTGATCCTCATCAGCCACTTTCATCATTGGACTTGAGCAGCTTCTTCAATCAATCAGATCAACAACTTGATGATGATGAACTCCAAGCTTTGGCTCGAGAATTTGTCTCTAGGTACTTGCCTGGAGTAAGATTTCAGCCATCTAATTCTCACTAA 651 0.4409 MDYCGGKIGGSDQRGGGPCGACKFLRRKCVKGCIFAPYFDSDQGTVHFAAVHKVFGASNASKLLMRIPAHKRLDAVVTLCYEALARARDPVYGCVAHIFALQQQVMSLQAELTYVQATLATMQRLPISLAPSLPNPQSSSPSFHSSSDHVGTNADMHSASNMSMHFDPHQPLSSLDLSSFFNQSDQQLDDDELQALAREFVSRYLPGVRFQPSNSH* 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1125 216 MobiDBLite consensus disorder prediction 130 165 - -
Mtr8g1125 216 Pfam Lateral organ boundaries (LOB) domain 18 116 IPR004883 -
Mtr8g1125 216 PANTHER LOB DOMAIN-CONTAINING PROTEIN 19 13 207 - -
Mtr8g1125 216 PANTHER LOB DOMAIN CONTAINING PROTEIN 13 207 - -
Mtr8g1125 216 ProSiteProfiles LOB domain profile. 17 119 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1125 Mtr-Chr8 13726345 13733559 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g1125 8 214 AS2 family AT4G00210 54.911 8.42e-77 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Mtr8g1125 LOB 1.4e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g1125 - - gmx:100791377 309.686
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g1874 7 34820323 34824599 Mtr8g1125 8 13726345 13733559 PCT