Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1124 ATGAGTATAAACTCAGGTTGTAGTGGTAGTGGTTGCAGTGGTGGTGCAAACGGTGGTGCTTGTGGCCCTTGTGGCGCGTGCAAGTTTTTGAGAAGGAAGTGTATCCCGGGATGTATTTTTGCGCCTTACTTCGATTCGGAGCAAGGCGCTTCACATTTCGCAGCGGTTCACAAGGTTTTTGGGGCTAGTAACGTTTCAAAGTTGCTACAAAATGTTCCGGTGCACAAGCGTCTTGATGCGGTTATCACCATTTGTTATGAAGCTCAAGCAAGGTTGAGAGATCCCATCTTTGGTTGTGTTGCTCATATCTTTACTCTTCAGCAACAGGTGATGAGTTTACAAGCAGAACTCTCCTACTTACAAGGCCACCTAGCTACATATGAAGTACCTCAACCACCAACACCTTCTCCACCACAAGCACTTCCAATGGTCTCACTAGCCAACCTCCCATTAGCCCCTTCTTCAGCCATGCCAGACACATATGACTTGTCTTCATTGTATGAAGTACCCCAAACTTCATCATGGGTCATGCAACAAAGGACCAATGAGCCCCGCCAATATTTGGGAAGTGACACATCATCCACTAGTAATAATGGTGGTGATCTTCAAGCATTGGCTAGAGAGCTTTTGCATAGATATGGATCTATTCCTCATGTTGCTTGCTCTAATGCCCCATCATCTCATTCTCTTTCCAAATGA 699 0.4564 MSINSGCSGSGCSGGANGGACGPCGACKFLRRKCIPGCIFAPYFDSEQGASHFAAVHKVFGASNVSKLLQNVPVHKRLDAVITICYEAQARLRDPIFGCVAHIFTLQQQVMSLQAELSYLQGHLATYEVPQPPTPSPPQALPMVSLANLPLAPSSAMPDTYDLSSLYEVPQTSSWVMQQRTNEPRQYLGSDTSSTSNNGGDLQALARELLHRYGSIPHVACSNAPSSHSLSK* 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1124 232 ProSiteProfiles LOB domain profile. 22 124 IPR004883 -
Mtr8g1124 232 PANTHER LOB DOMAIN CONTAINING PROTEIN 5 215 - -
Mtr8g1124 232 PANTHER LOB DOMAIN-CONTAINING PROTEIN 18 5 215 - -
Mtr8g1124 232 Pfam Lateral organ boundaries (LOB) domain 23 121 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1124 Mtr-Chr8 13705589 13711371 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g1124 26 211 AS2 family AT4G00220 62.632 2.35e-76 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Mtr8g1124 LOB 7.5e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g1124 K21994 - gmx:100779541 295.819