Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1121 ATGGATCAAGTAGCACAAGGTCGTCCTCTTCCACCTCCATTTCTCACTAGAGACCTTCATCTTCATCCTCACCATCAATTTCACACCAACCACCAAACCAATGAAGAGGAACAACAAAGTGGCAATGGGAGCTTAAGCCGAGGCCAAAAAAGAGAACGAAACAACGAAGACGGCAACAACACTCCCACCGGAGGAGAAGGAAAAGACGACGGTGGTAGCGGAAGTGCTGGTGGAGGAAGTGGTGGTGAGATGGGAAGAAGACCAAGAGGAAGACCAGCAGGTTCGAAAAACAAACCAAAACCACCTATCATCATCACGAGGGACAGCGCGAACGCACTCCGATCCCACGTGATGGAAGTTGCAAATGGATGTGACATCATGGAAAGTGTGACGGTCTTTGCGCGAAGGAGGCAGCGTGGTGTCTGCATCCTTAGCGGAAGTGGGACCGTCACAAACGTGACTCTCCGTCAACCAGCATCGCCTGGTGCGGTAGTCACACTTCATGGAAGATTTGAGATATTATCATTATCTGGCTCTTTCCTGCCGCCGCCTGCTCCACCAGCGGCGTCAGGATTAGCCATATATCTAGCTGGTGGACAAGGACAGGTCGTCGGTGGTAGCGTGGTGGGACCGTTGTTAGCTTCCGGTCCGGTTGTTATCATGGCAGCTTCCTTTGGAAATGCTGCTTATGAAAGGCTACCTTTAGAAGATGAAGAAACACCAGTGAATGTGCCAGGAAATGGAGGGTTAGGGTCACCGGGAACCATGGGAAGTCAACAACAACAGCAGCAGAACCAGCAACAGCAACAACTTGTAGCAGATCCTAATGCTTCATCACTTTTCCATGGAGTTCCTCAAAATCTTCTCAATTCATGCCAATTACCAGCTGAAGGTTATTGGGGTGGAAGTGCTCGTCCTCCTTTTTAA 927 0.4995 MDQVAQGRPLPPPFLTRDLHLHPHHQFHTNHQTNEEEQQSGNGSLSRGQKRERNNEDGNNTPTGGEGKDDGGSGSAGGGSGGEMGRRPRGRPAGSKNKPKPPIIITRDSANALRSHVMEVANGCDIMESVTVFARRRQRGVCILSGSGTVTNVTLRQPASPGAVVTLHGRFEILSLSGSFLPPPAPPAASGLAIYLAGGQGQVVGGSVVGPLLASGPVVIMAASFGNAAYERLPLEDEETPVNVPGNGGLGSPGTMGSQQQQQQNQQQQQLVADPNASSLFHGVPQNLLNSCQLPAEGYWGGSARPPF* 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1121 308 MobiDBLite consensus disorder prediction 1 104 - -
Mtr8g1121 308 Pfam Plants and Prokaryotes Conserved (PCC) domain 114 226 IPR005175 -
Mtr8g1121 308 SUPERFAMILY AF0104/ALDC/Ptd012-like 110 245 - -
Mtr8g1121 308 ProSiteProfiles PPC domain profile profile. 110 248 IPR005175 -
Mtr8g1121 308 MobiDBLite consensus disorder prediction 33 48 - -
Mtr8g1121 308 PIRSF ESCAROLA 16 308 IPR014476 GO:0003680
Mtr8g1121 308 MobiDBLite consensus disorder prediction 236 278 - -
Mtr8g1121 308 Gene3D - 113 244 - -
Mtr8g1121 308 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 18 5 308 - -
Mtr8g1121 308 CDD DUF296 114 181 IPR005175 -
Mtr8g1121 308 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 5 308 IPR014476 GO:0003680
Mtr8g1121 308 MobiDBLite consensus disorder prediction 252 278 - -
Mtr8g1121 308 MobiDBLite consensus disorder prediction 18 32 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1121 Mtr-Chr8 13651739 13653413 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g1121 1 308 AT-hook Motif Nuclear Localized (AHL) Family AT2G45430 63.720 5.09e-90 269
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g1121 - - gmx:100816243 411.764