Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1115 ATGGATATGGCTATGGCTTCTTCTTCATCCTTTGATGGCTCTGGTCTGAAAAAATATGATGTTTTTATCAGCTTTCGAGGTGACGACACACGGGCTGGTTTCACAAGCCATCTTCACGCTGCATTGTGCCGAAGCAACTTTCATACATACATAGACTACAGGATCGAAAAAGGAGATGAAGTTTGGGGAGAACTTCAGAAAGCAATCAATGAATCCACTCTTTTTCTTGTCGTGTTCTCAGAGAACTACGCATTTTCAACATGGTGTTTGAACGAACTAGTTCAAATAATGGAGTGTAGCAACAACAATGAAAATGATAACGTTGTTGTTATTCCTGTGTTCTACCATGTTGACCCTTCACATGTTCGGAAGCAGACTGGCAGTTACGGCACTGCTTTGGCAAAACACATTGACCATAAGATGTTGCAAAATTGGAAGAATGCTCTTTTCGAAGCATCTAATTTATCTGGATTCCATTCTACCACATACAGGACTGAATCTGACTTGATTGAAGACATTATCAGAGTTGTATTAGGAAAATTAAATCACCGGTACGCAATTGAACTTACATATAGTTTCATACTCGATGAAAATTACTGGAGCATTAAATCTTTAATAAAAATTGATTCATCAGAAGTTCAAATCATTGGAGTTTGGGGAATGGGGGGCACAGGCAAGACAACCCTTGCTGCTGCCATGTTTCAAAGAGTCTCTTCTCACTATGAAGGCCATTGCTTCTTAGAAAATGTGACAGAACAATCAGAAAAGCATGGAATCAATGACACATGCAACAAACTTCTTTCCAAGTTACTAGGGGAAGACCTTGATATTACCACTCTCAAAGTAATACCATCCATGATCAGGAGAAGACTCAAACGCATGAAATCTTTCATTGTACTAGATGACGTACATACCTCGGAACTTCTACAAAACTTGATTGGAGTGGGACATGGTTGGTTAGGAGCTGGTAGCACAGTCATTGTGACGACTAGGGATAAGCATGTGCTGATAAGTGGAGGAATTGAAGAAATTTATGAAGTTAAGAAGATGAACTCCCAAAATTCCCTCCAGCTTTTCTGCTTGAATGCTTTTGACACTGTCTTCCCTAAGGAGGGATTTGTGGAGCTCTCAAAAAGAGCGATTGATTACGCCAAAGGCATCCCTTTAGCTCTGAAAGTTTTGGGATCATCACTTCGTTGCAAAAGTGAAATAGAATGGAATTGTGCACTGTCTAAACTGGAGAAAATTTCCAATGCCGAAATTGATAGGATACTAAGATGGAGTTATAATGAATTGGATGATAAAGAGAAAAATATATTTTTGGACATTGCATGCTTTTTCAAAGGGCGTGAAAGGAATAGCGTGACAAAAATATTAAATGACTGTGGTTTCTTTGCTGATATAGGGATAAGTCATCTTTTAGACAAGGCTCTTATAAGAGTTGACTATAAAAATTTCATACAAATGCATGACTTGATACAGGAAATGGGAAGACAAATTGTTCGTGAAGAATCTCTTAAGAATCCTGGACAACGCAGTAGATTATGTGATCCTAAGGAAGTTTTTGATGTATTGAAAAATAATAGAGGATCTGAGATTATTGAAGCCATATTTTTAGATGCTACTGAATATACACATATAAATTTAAACCCTAAAGCATTTGAAAAAATGGTAAATCTAAGGCTACTTGCTTTTCGAGACCACAAGGGAGTCAAATCTGTAAGCCTTCCACATGGTCTTGACTCATTGCCAGAAACTTTGAGATACTTTTTGTGGGATGGATACCCTTGGAAATCTCTGCCGCCAACTTTTTGTGCCGAAATGCTTGTGGAGCTTTCCATGCAAGAAAGCCATGTGGAAAAACTTTGGAATGGAGTACTGGATATGCCAAATTTAGAGGTACTTGATCTCGGTCGCTCCAGAAAGCTGATAGAGTGTCCAAATGTGTCTGGTTCCCCAAATCTAAAATATGTCACACTTGAAGATTGTGAAAGCATGCCTGAAGTCGATTCATCAATTTTCCTTCTGCAAAAGCTTGAAAGATTAAGCGTGTTAGGATGTACGTCGCTTAAGAGCCTTTCCAGTAACACTTGTTCTCCAGCCTTCCGTGAATTGAATGCTATGTTTTGCGACAATCTCAAAGATATCTCAGTCACATTTGCTTCCGTTGATGGTTTGGTTTTGTTTTTGACAGAATGGGATGGGAATGAACTTCCATCATCAATATTGCATAAAAAAAATCTTACAAGGTTAGTCTTTCCTATCAGTGATTGTCTTGTGGATCTTCCTGAAAACTTTTCCGACGAAATTTGGCTTATGAGTCAACGGAGTTGTGAACACGACCCTTTCATAACTTTACATAAAGTACTTCCTAGTCCTGCCTTCCAGAGTGTAAAAAGGTTAATTTTTTCCCATGCTCCTTTGTTGTCTGAAATCCCAAGCAATATCTCGTTACTATCGTCATTAGACTCTTTAACACTGTCTGGTTTAATCATCAGAAGCTTGCCTGAAACCATCAGGTATCTTCCCCAACTGAAACGTCTGGATGTTTTGAACTGTAAAATGCTTCAATCTATTCCACCGCTTTCAAAGCACGTTTGTTTTTTTATGTTATGGAATTGTGAATCGCTTGAGAAAGTGTTGAGTTTGAGTGAACCAGCTGAGAAACCTAGGTGTGGTTTTCTGCTCCTTAACTGCATAAAATTGGATCCACATTCATACCAAACAGTTTTAAACGATGCTATGGAAAGGATTGAACTTGTAGCAAAAGTAGTTTCAGAAAATGCATTTGTATGTGACAGTGCGTGGCACTTCTTACCTGCTATGCCTGGCATGGAAAATTGGTTCCATTACTCTTCTACACAAGTTTCTGTCACTCTTGAGCTTCCTTCTAATTTGTCGGGTTTTGCCTACTACTTGGTTCTTTCTCAAGGCCGTATGGGATATGGTGTAGATTTTGGATGTGAGTGCTTCTTGGACAATAATTCTGGTGAAAAAGTCTATATAACAAGTTTCACAAAAACCAGTTTCATAGGTTTGTTACGTCGTTTCGATCCATTAATCCACATGATGTCGGATCATTTAGTTTTTTGGTATGATGGAGGAAGTTGCAAGCAAATAATGGAAGCATTTGAAGAAATAAAAGCCGATAATGATGTGAACAACACTAGTTACAATCCAAAGCTTACATTTAGATTCTTTATTCATGAAAATATATACGATGAAGTAGTGATAAAAGAGTGTGGGTTTCACTGGATGTATAAGGAAGAAACAGTTCCTTTAACAATTTCTGAATCCCATGATGAAGAAGAAATTGCATCTTCATCGGATTTTCAATCCAATGATCAAGAAGTAATAGTTCCTCCAGAAAATTTTGAATCAGATGATCTAGAAGAAACAATTCCTTCAAGAAACAAATTAAAGCTAGGCATGTTTGGAACTCTGCCATCAAATCTAGAATTAGACGAAACATGTGATTTGAGATGTTCGCTTGAAGAGCTCATGCATATTGGATTTTTTGGAGATCACATGAACACTTTGTTTGGTTCCACAGAAGAACAAAGCAATTCTGAAGAGGAGAGAAAAAATGTCGAATGA 3597 0.3789 MDMAMASSSSFDGSGLKKYDVFISFRGDDTRAGFTSHLHAALCRSNFHTYIDYRIEKGDEVWGELQKAINESTLFLVVFSENYAFSTWCLNELVQIMECSNNNENDNVVVIPVFYHVDPSHVRKQTGSYGTALAKHIDHKMLQNWKNALFEASNLSGFHSTTYRTESDLIEDIIRVVLGKLNHRYAIELTYSFILDENYWSIKSLIKIDSSEVQIIGVWGMGGTGKTTLAAAMFQRVSSHYEGHCFLENVTEQSEKHGINDTCNKLLSKLLGEDLDITTLKVIPSMIRRRLKRMKSFIVLDDVHTSELLQNLIGVGHGWLGAGSTVIVTTRDKHVLISGGIEEIYEVKKMNSQNSLQLFCLNAFDTVFPKEGFVELSKRAIDYAKGIPLALKVLGSSLRCKSEIEWNCALSKLEKISNAEIDRILRWSYNELDDKEKNIFLDIACFFKGRERNSVTKILNDCGFFADIGISHLLDKALIRVDYKNFIQMHDLIQEMGRQIVREESLKNPGQRSRLCDPKEVFDVLKNNRGSEIIEAIFLDATEYTHINLNPKAFEKMVNLRLLAFRDHKGVKSVSLPHGLDSLPETLRYFLWDGYPWKSLPPTFCAEMLVELSMQESHVEKLWNGVLDMPNLEVLDLGRSRKLIECPNVSGSPNLKYVTLEDCESMPEVDSSIFLLQKLERLSVLGCTSLKSLSSNTCSPAFRELNAMFCDNLKDISVTFASVDGLVLFLTEWDGNELPSSILHKKNLTRLVFPISDCLVDLPENFSDEIWLMSQRSCEHDPFITLHKVLPSPAFQSVKRLIFSHAPLLSEIPSNISLLSSLDSLTLSGLIIRSLPETIRYLPQLKRLDVLNCKMLQSIPPLSKHVCFFMLWNCESLEKVLSLSEPAEKPRCGFLLLNCIKLDPHSYQTVLNDAMERIELVAKVVSENAFVCDSAWHFLPAMPGMENWFHYSSTQVSVTLELPSNLSGFAYYLVLSQGRMGYGVDFGCECFLDNNSGEKVYITSFTKTSFIGLLRRFDPLIHMMSDHLVFWYDGGSCKQIMEAFEEIKADNDVNNTSYNPKLTFRFFIHENIYDEVVIKECGFHWMYKEETVPLTISESHDEEEIASSSDFQSNDQEVIVPPENFESDDLEETIPSRNKLKLGMFGTLPSNLELDETCDLRCSLEELMHIGFFGDHMNTLFGSTEEQSNSEEERKNVE* 1199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1115 1198 SUPERFAMILY L domain-like 488 899 - -
Mtr8g1115 1198 ProSiteProfiles TIR domain profile. 17 181 IPR000157 GO:0007165
Mtr8g1115 1198 Gene3D Ribonuclease Inhibitor 788 891 IPR032675 -
Mtr8g1115 1198 Gene3D - 15 187 IPR035897 -
Mtr8g1115 1198 SMART till_3 18 155 IPR000157 GO:0007165
Mtr8g1115 1198 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 13 1058 - -
Mtr8g1115 1198 Gene3D - 349 433 IPR042197 -
Mtr8g1115 1198 Gene3D - 190 339 IPR027417 -
Mtr8g1115 1198 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 13 1058 IPR044974 GO:0006952
Mtr8g1115 1198 Pfam NB-ARC domain 203 431 IPR002182 GO:0043531
Mtr8g1115 1198 Gene3D Ribonuclease Inhibitor 518 731 IPR032675 -
Mtr8g1115 1198 SUPERFAMILY Toll/Interleukin receptor TIR domain 17 158 IPR035897 -
Mtr8g1115 1198 PRINTS Disease resistance protein signature 215 230 - -
Mtr8g1115 1198 PRINTS Disease resistance protein signature 290 304 - -
Mtr8g1115 1198 PRINTS Disease resistance protein signature 384 398 - -
Mtr8g1115 1198 PRINTS Disease resistance protein signature 627 643 - -
Mtr8g1115 1198 Pfam TIR domain 18 183 IPR000157 GO:0007165
Mtr8g1115 1198 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 182 443 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1115 Mtr-Chr8 13603795 13608956 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g1115 14 825 WRKY Transcription Factor Family AT4G12020 31.598 2.63e-95 334
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g1115 - - mtr:MTR_8g018480 1777.68