Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1113 ATGCATATGTTGACAATGGAAGCTAAACCTCTTCAACTTGTTCCCTCTTCACACAACAGCACAACTGGTGGTGGACCCCAGATGAAGATTGAGAATGGTGAAGTTGATGAAGAGAAAAGGGTTGTTGTTGGAGTGAAGGAAGATATAGAAAACAAGCCTTTGATCACAGAAGCTCAAAGGCGTGAACTTGATCATCAAGTTTTTATTTTTAATCATTTTGCTTATAATCTTCCTCTTCCTTATTACCTTTTGCAATTTCCAAGTAATATGTCAGAGTACAGTCGTCGTGGGTCTGATTATGTGACTATGGTGGATCAAGAACCACATAGGTGTAGAAGAACTGACGGAAAGAAATGGAGGTGCGGCAAGGACACAGTACCTAATCAGAAGTATTGTGAACGTCACATGCACAGAGGTCGAAATCGTTCAAGAAAGCTTGTGGAAACATCTCAACTTAACTCTCCTTTGAAAACAAATCCTAGTGGTGGTGGCAAGTCACATGCAAAACTAGTCCCAAACATTAAATCTTCAGTTTCAAATCCAAACCCTTTGATTATTCATCACAATGGCACATTCTCATACAATCCGAGGACCTTCTGCGTTGTAGATACTTCTTCTGTTTGTGATCGGTCGAGACATGTCATAGATTATGGTGCCACTGCAGTGACAACTTCGGGAAGCACGACATCCGTTTCTTTGGATAACAGAGTTTGTCCTAACGTATGCAAGCAAGATGAGCAGATCAAGAGGTGTATCACCGACAACGTGGGTATTAAAAGTGGTCGGAAAGGAAGCATATCTTGTGAAAGTATTGGCATCTCTACTGGAATAGGCTTTTCCCCAAAGAGTGTTCTTCCAGTTTCTGGTTGCAATGATTCATACCTCAACAACAGAAACAATATATTAGAACCTGAACCCGGTAGATGCCGAAGAACAGATGGTAAGAAGTGGCGATGCAAGAGTGCGGTTCTTCCAGGTCAGAAGTATTGTGCAACACATATGCATAGAGGTGCTAAAAGGCGTTTTACAAACCTCGAATCTCCTCCTCCTGCCACCACTGTTATTCCTAAAACTACTGATATTAGTTCAGCTGTTACCATTGCTCAGTTGCCCGACCCTTCGGCTCCAATCGACATCCAGAAAGCGAATTGTTGGTCTCCGAGCACTAAGCTTTCAATGTCGGTTCAAGAAAGTGCGCCCTTTGTTGATTGTAATGAGAAAAGTGTTAGCAGCGGTGACACGGATGGTACTAGTACCACCATCACTGACACCATGAATGAGTGTAGCTATCTTTCTTTCTAA 1302 0.4232 MHMLTMEAKPLQLVPSSHNSTTGGGPQMKIENGEVDEEKRVVVGVKEDIENKPLITEAQRRELDHQVFIFNHFAYNLPLPYYLLQFPSNMSEYSRRGSDYVTMVDQEPHRCRRTDGKKWRCGKDTVPNQKYCERHMHRGRNRSRKLVETSQLNSPLKTNPSGGGKSHAKLVPNIKSSVSNPNPLIIHHNGTFSYNPRTFCVVDTSSVCDRSRHVIDYGATAVTTSGSTTSVSLDNRVCPNVCKQDEQIKRCITDNVGIKSGRKGSISCESIGISTGIGFSPKSVLPVSGCNDSYLNNRNNILEPEPGRCRRTDGKKWRCKSAVLPGQKYCATHMHRGAKRRFTNLESPPPATTVIPKTTDISSAVTIAQLPDPSAPIDIQKANCWSPSTKLSMSVQESAPFVDCNEKSVSSGDTDGTSTTITDTMNECSYLSF* 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1113 433 MobiDBLite consensus disorder prediction 12 27 - -
Mtr8g1113 433 ProSiteProfiles WRC domain profile. 105 149 IPR014977 -
Mtr8g1113 433 MobiDBLite consensus disorder prediction 1 30 - -
Mtr8g1113 433 MobiDBLite consensus disorder prediction 139 169 - -
Mtr8g1113 433 PANTHER - 285 364 IPR031137 GO:0005634|GO:0006351|GO:0032502
Mtr8g1113 433 PANTHER - 36 226 IPR031137 GO:0005634|GO:0006351|GO:0032502
Mtr8g1113 433 PANTHER GROWTH-REGULATING FACTOR 9 36 226 - -
Mtr8g1113 433 PANTHER GROWTH-REGULATING FACTOR 9 285 364 - -
Mtr8g1113 433 ProSiteProfiles QLQ domain profile. 54 89 IPR014978 GO:0005524|GO:0005634|GO:0006355
Mtr8g1113 433 MobiDBLite consensus disorder prediction 146 161 - -
Mtr8g1113 433 Pfam WRC 304 342 IPR014977 -
Mtr8g1113 433 Pfam WRC 107 148 IPR014977 -
Mtr8g1113 433 ProSiteProfiles WRC domain profile. 303 347 IPR014977 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1113 Mtr-Chr8 13575434 13578894 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g1113 53 341 GRF Transcription Factor Family AT2G45480 32.047 1.36e-34 131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g1113 - - mtr:MTR_8g035910 863.988
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g1113 8 13575434 13578894 Mtr8g1113 8 13575434 13578894 ECH