Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1111 ATGGATCAAAATCAGAAACGGGAGCACGAATGGTCGATTAACGACTTCGAGATCGGAAAGCCACTCGGTAGAGGCAAATTCGGCAGAGTCTATGTTGCCAGAGAAGTCAAGAGTAAATATGTGATTGCATTGAAGGTCATCTTTAAGGAACAACTAGAAAAGTATAACATTCTTCATCAACTGAGGAGGGAAATGGAGATACAGATCAGTCTTAAACATCCAAACATCTTGCGTCTATACGGTTGGTTTCATGATGCCGAGCGTGTTTACTTGATTCTTGAATATGCTCATAATGGTGAACTATACAAGGAGCTTCGCAAAAAAGGTCATTTCTCTGAGAAACAAGCTGCAACGTACATTTTAAGCCTCACAAAGGCATTGGCATATTGTCACGAGAAGCATGTTATTCACAGAGATATCAAGCCTGAAAATCTGTTGCTTGACCATGAGGGTCGTCTTAAGATTGCAGACTTTGGTTGGTCTGTACAATCTGTAAAAAAAAGAAAGACAATGTGTGGAACATTGGATTATTTAGCTCCTGAAATGGTAGAAAACAAAGGTCATGATTATGCAGTTGATAACTGGACTCTGGGTATTCTTTGTTATGAGTTCCTCTATGGTGTTCCTCCATTTGAGGCTGAGAGTCAAGAAGATACCTTCAAAAGGATAAGAGATGTTGATCTGAACTTCCCTCCTACCCCTCATGTTTCTAAGAATGCCAAAAATCTGATAAGTCGGCTACTGGTAAAAGATTCTTCAAAAAGGCTCCCACTTCAGAAGATAATGGAGCATCCTTGGATAAAAGAGAATGCAAACCATACGGGTGTCTGCGAGTAG 837 0.4026 MDQNQKREHEWSINDFEIGKPLGRGKFGRVYVAREVKSKYVIALKVIFKEQLEKYNILHQLRREMEIQISLKHPNILRLYGWFHDAERVYLILEYAHNGELYKELRKKGHFSEKQAATYILSLTKALAYCHEKHVIHRDIKPENLLLDHEGRLKIADFGWSVQSVKKRKTMCGTLDYLAPEMVENKGHDYAVDNWTLGILCYEFLYGVPPFEAESQEDTFKRIRDVDLNFPPTPHVSKNAKNLISRLLVKDSSKRLPLQKIMEHPWIKENANHTGVCE* 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1111 278 ProSitePatterns Serine/Threonine protein kinases active-site signature. 135 147 IPR008271 GO:0004672|GO:0006468
Mtr8g1111 278 PANTHER SERINE/THREONINE-PROTEIN KINASE IAL-RELATED 5 276 IPR030616 GO:0004672
Mtr8g1111 278 ProSitePatterns Protein kinases ATP-binding region signature. 22 49 IPR017441 GO:0005524
Mtr8g1111 278 Gene3D Phosphorylase Kinase; domain 1 3 99 - -
Mtr8g1111 278 CDD STKc_Aurora 15 268 - -
Mtr8g1111 278 SUPERFAMILY Protein kinase-like (PK-like) 7 270 IPR011009 -
Mtr8g1111 278 Pfam Protein kinase domain 16 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g1111 278 SMART serkin_6 16 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g1111 278 Gene3D Transferase(Phosphotransferase) domain 1 100 276 - -
Mtr8g1111 278 ProSiteProfiles Protein kinase domain profile. 16 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g1111 278 PIRSF ILK 2 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1111 Mtr-Chr8 13563731 13569229 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g1111 16 272 CBL-interacting serine-threonine protein kinases AT5G25110 37.643 2.76e-59 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Aur Mtr8g1111 Pkinase 1.1e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g1111 K08850 - gmx:100775802 491.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g1111 8 13563731 13569229 Mtr8g1111 8 13563731 13569229 ECH