Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1110 ATGAAAATGCAGAAAGCTTGGTTCTATGAGGAGTATGGTCCTAAGGAAGTCCTTAAGCTAGGGGACTTTCCTATTCCATCCCCTCTGGAAAACCAACTACTTGTCCAAGTTCATGCTGCTGCTTTGAATCCTATTGATTCAAAGAGGCGTATGCGTCCTATTTTTCCGTCTGAGTTTCCCGCGGTTCCTGGATGCGATATGGCTGGTGTGGTTATCGGAAAAGGAGTTAATGTCAAAAAATTTGACATAGGTGATGAAGTGTATGGAAACATACAAGATTTCAACAGTATGGAAAAACCAAAGCAGCTTGGAACATTGGCACAATTCATTGTTGTGGAAGAGAAGTTAGTTGCAAGAAAACCAAAATGTCTTTCATTTGAGGAAGCTGCAAGTTTGCCTTTGGCAGTACAGACAGCAATAGAAGGATTCAAAACAGGAGATTTTAAGAAGGGTGAGACAATGTTTGTGGTTGGTGGAGCAGGTGGTGTTGGCACTTTGGTCCTTCAATTGGCGAAACTTATGTTTGGAGCTTCCTATGTTGTGTCTTCATGTAGCACTCCTAAATTGAAATTTGTGAAGCAGTTTGGTGCTGATAAAGTTGTTGACTATACTAAGACTAAGTATGAAGATATTGAGGAGAAATTTGATTTCCTTTATGATACAGTTGGTGATTGCAAGAAATCATTTGTGGTAGCAAAGAAAGATGGAGCAATAGTTGACATAACATGGCCAGCATCACATGAAAGAGCAGTTTATTCAAGTTTGACAGTTTGTGGTGAAATATTGGAAAAGCTGAGACCATATTTGGAAAGAGGAGAGTTAAAAGCTGTGATTGATCCAAAAGGTGAATATGATTTTGAGAATGTGATTGATGCATTTGGTTATATTGAAACTGGAAGAGCTTGGGGTAAAGTTGTTGTCACTATTCCTCATCATCACTCTACCACTATTTTATCTGAGATTGATACCAATACATTACAACTCAATGGTTTGGCAGCAAAAAATCTTTGTCTCAAGTAG 1020 0.3873 MKMQKAWFYEEYGPKEVLKLGDFPIPSPLENQLLVQVHAAALNPIDSKRRMRPIFPSEFPAVPGCDMAGVVIGKGVNVKKFDIGDEVYGNIQDFNSMEKPKQLGTLAQFIVVEEKLVARKPKCLSFEEAASLPLAVQTAIEGFKTGDFKKGETMFVVGGAGGVGTLVLQLAKLMFGASYVVSSCSTPKLKFVKQFGADKVVDYTKTKYEDIEEKFDFLYDTVGDCKKSFVVAKKDGAIVDITWPASHERAVYSSLTVCGEILEKLRPYLERGELKAVIDPKGEYDFENVIDAFGYIETGRAWGKVVVTIPHHHSTTILSEIDTNTLQLNGLAAKNLCLK* 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1110 339 CDD MDR_like_2 5 307 - -
Mtr8g1110 339 Gene3D - 11 307 - -
Mtr8g1110 339 SUPERFAMILY GroES-like 3 156 IPR011032 -
Mtr8g1110 339 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 124 250 IPR036291 -
Mtr8g1110 339 SMART PKS_ER_names_mod 13 307 IPR020843 GO:0016491
Mtr8g1110 339 Gene3D - 143 258 - -
Mtr8g1110 339 PANTHER NADPH-DEPENDENT ALKENAL/ONE OXIDOREDUCTASE, CHLOROPLASTIC 4 314 IPR044626 GO:0016628
Mtr8g1110 339 Pfam Zinc-binding dehydrogenase 196 307 - -
Mtr8g1110 339 Pfam Alcohol dehydrogenase GroES-like domain 31 90 IPR013154 -
Mtr8g1110 339 PANTHER 2-METHYLENE-FURAN-3-ONE REDUCTASE-LIKE 4 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1110 Mtr-Chr8 13557752 13559572 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g1110 4 222 Monolignol Biosynthesis Gene Families AT3G19450 25.203 6.49e-06 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g1110 K18980 - jre:109006930 477.248