Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1100 ATGAAAATGCAGAAAGCTTGGTTCTATGAGGAGTATGGTCCTAAGGAAGTCCTTAAGCTAGGGGACTTTCCTATTCCATCCCCTCTGGAAAACCAACTACTTGTCCAAGTTTATGCTGCTGCTTTGAATCCTATCGATTCAAAGAGGCGTATGCGTCCTATTTTTCCATCTGATTTTCCTGCGGTTCCTGGATGCGATATGGCTGGTGTGGTTATCGGAAAAGGAGTTAATGTCAAAAAATTTGACATAGGTGATGAAGTCTATGGAAACATACAAGATTTCAACAGTATGGAAAAACCAAAGCAGCTTGGAACATTGGCACAATTCATTGTTGTGGAAGAGAACTTAGTTGCAAGAAAACCTAAACGTCTTTCATTTGAGGAAGCTGCAAGTTTGCCTTTGGCAGTACAGACAGCAATAGAAGGATTCAAAACAGGAGATTTTAAGAAGGGTGAGACAATGTTTGTGGTTGGTGGAGCAGGTGGTGTTGGCACTTTGGTCCTTCAATTGGCCAAACTTATGTTTGGAGCTTCCTATGTTGTGTCTTCATGTAGCACTCCTAAATTGAAATTTGTGAAGCAGTTTGGTGCTGATAAAGTTGTTGACTATACTAAGACTAAGTATGAAGACATTGAGGAGAAATTTGATTTCATTTATGATACAGTTGGTGATTGCAAGAAATCATTTGTGGTAGCAAAGAAAGATGGAGCAATAGTTGACATAACATGGCCAGCATCACATGAAAGAGCAGTTTATTCAAGTTTGACAGTTTGTGGTGAAATATTGGAAAAGCTGAGACCATATTTGGAAAGAGGAGAGTTAAAAGCTGTGATTGATCCAAAAGGTGAATATGATTTTGAGAATGTGATTGATGCATTTGGTTACATTGAAACTGGAAGAGCTTGGGGAAAAGTTGTTGTCACATGCTTCCCTATGGCACCAAAAGATCGTCACTCTACCATTTTATCTGAGATTGATACCAATATACCACAAGTCAATGGTTTTGCAAAAGATCTTTGCCTCAAGTAG 1029 0.3907 MKMQKAWFYEEYGPKEVLKLGDFPIPSPLENQLLVQVYAAALNPIDSKRRMRPIFPSDFPAVPGCDMAGVVIGKGVNVKKFDIGDEVYGNIQDFNSMEKPKQLGTLAQFIVVEENLVARKPKRLSFEEAASLPLAVQTAIEGFKTGDFKKGETMFVVGGAGGVGTLVLQLAKLMFGASYVVSSCSTPKLKFVKQFGADKVVDYTKTKYEDIEEKFDFIYDTVGDCKKSFVVAKKDGAIVDITWPASHERAVYSSLTVCGEILEKLRPYLERGELKAVIDPKGEYDFENVIDAFGYIETGRAWGKVVVTCFPMAPKDRHSTILSEIDTNIPQVNGFAKDLCLK* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1100 342 Pfam Zinc-binding dehydrogenase 196 307 - -
Mtr8g1100 342 CDD MDR_like_2 5 307 - -
Mtr8g1100 342 PANTHER 2-METHYLENE-FURAN-3-ONE REDUCTASE-LIKE 4 314 - -
Mtr8g1100 342 SUPERFAMILY GroES-like 3 156 IPR011032 -
Mtr8g1100 342 SMART PKS_ER_names_mod 13 307 IPR020843 GO:0016491
Mtr8g1100 342 Gene3D - 143 258 - -
Mtr8g1100 342 PANTHER NADPH-DEPENDENT ALKENAL/ONE OXIDOREDUCTASE, CHLOROPLASTIC 4 314 IPR044626 GO:0016628
Mtr8g1100 342 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 124 250 IPR036291 -
Mtr8g1100 342 Gene3D - 11 307 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1100 Mtr-Chr8 13447357 13449373 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g1100 4 222 Monolignol Biosynthesis Gene Families AT3G19450 25.203 2.52e-06 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g1100 K18980 - jre:109010331 476.092
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g1100 8 13447357 13449373 Mtr8g1100 8 13447357 13449373 ECH