Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1096 ATGCCATCCCGTCCTCCGCCACCACAACCACTTCCAACCATAGCAACCATCACACCTCCCCACCACCACCACCACCGCCGTGAGTTTCTAATCGGCGGTCTCATCGCCGCCGTCATCTTCCTCACCGCCGCAATAATCTCCCTCACTATCTTCCTCTACCGTAAACTCTCACACAACCGAACAACACCCGTGGACCAAAACCACCGCCGCTTCTCCTACTCCGTCCTCCGCCGCGCTTCAAACTCATTCTCCACCTCCACTCGCCTCGGCCACGGCGGCTTCGGTTCCGTTCATAAAGCCACACTCCCCTCCGGCGAAACCGTCGCTTTGAAAGTAATGGATTCGCCCGGTTCGATTCAAGGTGAAAGAGAGTTTCACAACGAACTCTCTTTATGCTCGAATCTTCGTTCTCCTTTCATTCTCTCACTTCTCGGTTACTCTTCGGACCGGTCCGGTCGGAAGCTGGTTTTGGTTTACGAGCTTATGTCGAACCGGAGTCTTCAAGATGCGCTTTTAGACCGGAGGTGTGATGAGTTGATGGTTTGGTCGAACCGGTTCGATGTGGTTGTTTCGGTTGCGAAAGGACTTGAGTATCTTCATCATGAATGTAATCCTCCTGTGATTCATGGTGATATTAAACCTAGTAATGTTCTTTTGGATCGTGAATTTAGAGCTAAGATTGGGGATTTTGGTCTTGCTAGGGTTAAGTGTTTGGAAGATTCTGGAATGGAAATGATGGTTGAAGAAATTAATCATCATCATCATCATCATGAGAAGAAGAAAAAGAAAGATGATTTTGTTGTTGAGGATTGTAGTTCTGTTTCTGTTGTTGAGGAATTTGAGAGTGCTGTTAGTGTTACTAATACTACTGCTGGAAATGATATTGATCGGTCGCCGGAGAGCTGTAATGTTAGGGTTTTGGTTGATTCTGATGCTTCACCGGAGGTGGCGGTTGTTTCGCAATCAAGTGTTGTGTCTGATGGGTGTTTTGATAAGTTTAGTATTGATAGTGGGAATCAGAGGAAGAGGGGTGGTGGTGGTGGTGGTGGTTCTGGGAGGGATTGGTGGTGGAAGCAGGAGAATAATGGGGGAGGATCTGAATCAGGGAGAGTGAAGGATTATGTGATGGAGTGGATTGGGAGTGAGATAAAGAAAGAGAGACCTAAGAGTAGTGAGTGGGTTGGTTCTGGTTCTTCGATTTGTTCCGGTGGTGGTGGTGATGTGGTGGCAGCGCAGTCGAAGGTGGAGGGTAAGAAGAAGCAGAGGAAGAAATTGGAATGGTGGGCTTCACTTGATGAGGAGAAAGTTAAAGGAAAGAAGAATAGAAAACCAAGGGAATGGTGGAAGGAGGAATTTTGTGAAGAGCTTTCGAAGAAGAGTAGGAAGAAAAAGAGAAGCCTTGATTGTCGCGGCAATGGAGGGGAATCGTGGTGGCAGAGAGACGAGGATGTAGGCGGCGCAGCAGTAGAGAAGAAGAAAAAGAGGAAAAGTAAGAGTAGTAGAGGGAGTATTGATTGGTGGTTGGATGGTTTAAGCGGCGAGCTTAGGACTAACGGAAGGAGAAATAGTCAAGATTGGGGTAATGGTGATATACCGAAGAGTGGTGGAATAAGTAGCACACCGAGTATGAGAGGAACTGTTTGTTACATTGCTCCTGAATACGGTGGTGGTGGTCAATTATCCGAGAAATGTGATGTGTATAGTTTCGGTGTTCTGCTTTTGGTTCTGGTTGCTGGAAGAAGACCATTACAAGTAACAGCATCACCGATTTCAGAATTCGAGAGAGCAAATCTAATTTCATGGGCTAGACAACTTGCTCATAATGGAAAACTCTTGGATCTTGTTGATAGTTCTATACATTCTTTGGATAAAGAACAAGCATTGCTATGTATCACCATTGCATTGCTATGTTTGCAGAGATCTCCTGGGAAAAGGCCTTCCATGAAGGAGATTGTAGGGATGCTTTCTGGTGAAGCTGACCCACCTCACTTGCCCTTTGAATTCTCACCTTCACCACCCTCAAATTTCCCTTTCAAATCAAGAAAAAAAGCTAGGTGA 2058 0.4621 MPSRPPPPQPLPTIATITPPHHHHHRREFLIGGLIAAVIFLTAAIISLTIFLYRKLSHNRTTPVDQNHRRFSYSVLRRASNSFSTSTRLGHGGFGSVHKATLPSGETVALKVMDSPGSIQGEREFHNELSLCSNLRSPFILSLLGYSSDRSGRKLVLVYELMSNRSLQDALLDRRCDELMVWSNRFDVVVSVAKGLEYLHHECNPPVIHGDIKPSNVLLDREFRAKIGDFGLARVKCLEDSGMEMMVEEINHHHHHHEKKKKKDDFVVEDCSSVSVVEEFESAVSVTNTTAGNDIDRSPESCNVRVLVDSDASPEVAVVSQSSVVSDGCFDKFSIDSGNQRKRGGGGGGGSGRDWWWKQENNGGGSESGRVKDYVMEWIGSEIKKERPKSSEWVGSGSSICSGGGGDVVAAQSKVEGKKKQRKKLEWWASLDEEKVKGKKNRKPREWWKEEFCEELSKKSRKKKRSLDCRGNGGESWWQRDEDVGGAAVEKKKKRKSKSSRGSIDWWLDGLSGELRTNGRRNSQDWGNGDIPKSGGISSTPSMRGTVCYIAPEYGGGGQLSEKCDVYSFGVLLLVLVAGRRPLQVTASPISEFERANLISWARQLAHNGKLLDLVDSSIHSLDKEQALLCITIALLCLQRSPGKRPSMKEIVGMLSGEADPPHLPFEFSPSPPSNFPFKSRKKAR* 686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1096 685 Pfam Protein kinase domain 84 235 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g1096 685 Pfam Protein kinase domain 540 652 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g1096 685 MobiDBLite consensus disorder prediction 336 368 - -
Mtr8g1096 685 MobiDBLite consensus disorder prediction 663 685 - -
Mtr8g1096 685 PANTHER OS07G0586332 PROTEIN 1 685 - -
Mtr8g1096 685 SUPERFAMILY Protein kinase-like (PK-like) 57 674 IPR011009 -
Mtr8g1096 685 Gene3D Transferase(Phosphotransferase) domain 1 162 277 - -
Mtr8g1096 685 Gene3D Transferase(Phosphotransferase) domain 1 513 661 - -
Mtr8g1096 685 MobiDBLite consensus disorder prediction 518 538 - -
Mtr8g1096 685 ProSitePatterns Protein kinases ATP-binding region signature. 89 111 IPR017441 GO:0005524
Mtr8g1096 685 ProSitePatterns Serine/Threonine protein kinases active-site signature. 207 219 IPR008271 GO:0004672|GO:0006468
Mtr8g1096 685 PANTHER OS07G0586332 PROTEIN 1 685 IPR044576 -
Mtr8g1096 685 ProSiteProfiles Protein kinase domain profile. 83 666 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g1096 685 Gene3D Phosphorylase Kinase; domain 1 54 161 - -
Mtr8g1096 685 SMART serkin_6 83 655 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1096 Mtr-Chr8 13391849 13394274 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g1096 515 655 Receptor kinase-like Gene Family AT3G58690 34.899 2.15e-14 73.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XI Mtr8g1096 Pkinase 3.9e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g1096 - - aip:107626015 864.759
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g1096 8 13391849 13394274 Mtr8g1096 8 13391849 13394274 ECH