Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1073 ATGGACAATCATGGTTCTGCACCTCCATATGGATATCCAAACCCTTATGCATATCCTCCATATCCATACCCTCCTCCAAATCCATCTCATGATCCATATGCACCTTCACCAGTATCTTCTCCTTATCCATATGAATCATATCCACCAAATTCTTCACATTCCTTCCACCCTTATCAACCAAACCCTTTAGAGTTACCTACTTCTCAACCATCTCATGTTTATCCTTACCCTTACCAACAATACCCTCCAATCAATGATGGTTCAAACCCTCATCATAGTTCTGCTTACCCCCCTTACCAACAATACCCTCCAATTAGTGATGGTTCAAACCCTCCTCATGGTTCTGCATATCCTCACCAATACCCTCCAATTAGTGATGGTTCACACCCTCCTAGTTCTCCTTACCCTCATTTGAATGATCTTATGAGCAATGTTCAGATATCTGATAATCAGCCAAGTGCACCAGTAATGACACATTCCTATTCAGCTTTAAATGAAGGGAAAAAAGAGGAGTTTTATGGTCATTCTAGTAGTAATTCTTTTTCAGGTTATGAACATTCTTACTCTGGTTTGGGGGGTTCACCCAATCTTTCAGCTTATCCCGGTTCGAATGATGAATCGGTGCATAGCCAGAGTTTGCAGATTGTTCCAGCTCAGTATAAAGGGTCATTGAAATATTTGCTCTTGCATGGTAATTTAGATATTTGTGTTCATAGTGCTAAGAATCTTCCAAATATGGATATGTTTCATAAGACTTTAGGGGATGTGTTTGGTAAATTTCCTGGTAATGTGGGTAATAAGATTGAGGGAACAATGACTAGGAAGATTACTAGTGATCCTTATGTGTCTATTTCTTTATCAAATGCTGTAGTTGGTAGGACTTTTGTGATTAGCAATAGCGAAAATCCTGTTTGGGAGCAACACTTTCATGTTCCTGTTGCACATCATGCTTCTGAAGTGCATTTTGTTGTTAAGGATAGTGATGTGGTAGGTTCACAGCTTATTGGTACTGTAGCGATTCCGGTCGAACAATTATACTCGGGTGAAAAAGTACAAGGGACCTACCCCATCCTTAATAGCAATGGAAAGCCTTGTAAGCCAGGTGCTGTTTTGAGTGTTTCCATTCAGTTCCTACCAATGGAGAAACTGATCATTTATCATCAAGGAGTTGGAGCAGGACCTAACTATATTGGTGTGCCGGGAACATATTTTCCATTGAGGAAAGGTGGAACTGTAACTCTATATCAGGATGCTCATGTTCCGGATGGATGTCTCCCTAATGTCATGCTTGATCATGGGATGCATTATGTTCATGGACAGTGTTGGCTTGATATGGTTGATGCCATACGTCAAGCGAAGCGTTTGGTTTACATTACAGGGTGGTCAGTGTGGCACAAAGTTCGGTTGGTAAGGGACGCTCCTGCTGGATATGGTAAGACATCGGATTATACTCTTGGTGAGCTTCTGAGGTCTAAGTCTCAGGAAGGAGTGAGAGTGCTTCTTCTTGTTTGGGATGACCCTACCTCAAGAAGCATTCTTGGTTATAAAACGGATGGTGTCATGGCGACGCATGATGAGGAAACTCGACGATTTTTCAAGCATTCTTCTGTGCAAGTGTTACTTTGTCCTCGCATGGCCGGAAAACGACATAGCTGGGCTAAGCAACAGGAAGTTGGAACAATATATACACATCATCAGAAGACTGTAATTGTAGATGCTGATGCTGGAAATAACTTCAGAAAAATTGTAGCATTTGTTGGAGGGCTTGACTTGTGTGACGGCCGATATGATACTCCCCACCATCCCCTCTTTAGGACACTGCAGACGGTCCATAAGGATGACTATCACAACCCTACTTTCACGGGTAATACTGGTGGTTGTCCACGGGAACCGTGGCACGACTTGCATTCTAAAATTGATGGTCCAGCAGCTTATGATGTTTTGACAAACTTTGAGGAGCGCTGGTTAAGAGCTGCGAAACCTACAGGGATAAAAAAGTTGAAGAGTTCATATGACGATGCATTGCTCAAGATAGAAAGAATTCCGGATATTCTCCGCGTATCTGATGCTCCTAGTGTTGGTGATGATAATCCTGTAGCTTGGCATGCTCAGATATTTCGTTCAATTGATTCAAACTCTGTCAAGGGATTTCCAAAGGAGCCAAGAGATGGATCAATAAAGAACCTAGTATGTGGGAAGAATGTACTGATTGACATGAGCATACACACAGCGTATGTAAAGGCCATTCGTGCTGCACAGCATTACATTTATATAGAGAATCAATATTTCATCGGTTCTTCATACAATTGGAGTCAAAATAGGGACATCGGTGCTAATAATTTAATTCCTATGGAAATTGCACTGAAGATTGCTGAAAAAATAAAGGCAAATGAGAGGTTTGCAGTATACATAGTTATTCCAATGTGGCCAGAGGGTGTTCCAACAGGTGCTGCCACTCAAAGGATTCTATTTTGGCAGAATAAAACAATGCAAATGATGTATGAGACAGTTTACAAGGCATTGGTTGAAGTTGGGCTCGAAGCAGCATTCTCTCCACAAGACTATTTAAACTTTTTCTGTCTTGGAAATCGAGAAACCATAGATATGCATGAGAATATTTCTGTATCTGGAATTCCTCCTCCACCGAATACTCCACAGGCAAATAGTCGAAATAACCGACGGTTCATGATTTATGTTCATTCGAAAGGCATGATAGTTGATGATGAATATGTGATCATTGGATCAGCAAACATCAACCAGCGCTCTATGGAAGGAACAAGGGACACTGAGATTGCAATGGGAGCCTACCAACCTGAATATACATGGGCAAGAAAACATTCTTATCCACGCGGACAGGTTCATGGATATAGGATGTCCCTATGGGCAGAACATACAGGCACAATCGAAGACTGTTTCTTACAACCAGAGAGCCTCGACTGTGTGAGAAGGGTTCGAACAATGTCCGAAATGAACTGGAAACAATTTTCATCAAACGACGTCACAGAGATGAGAGGGCATTTACTAAAGTACCCTGTAGAAGTTGATAGAAAGGGTAAGGTTAGACCTCTTCCTGGTCATGAAGAGTTTCCTGATGTGGGAGGAAAGATAGTGGGATCATTTATTGCCATTCAAGAGAATCTAACCATTTGA 3150 0.4162 MDNHGSAPPYGYPNPYAYPPYPYPPPNPSHDPYAPSPVSSPYPYESYPPNSSHSFHPYQPNPLELPTSQPSHVYPYPYQQYPPINDGSNPHHSSAYPPYQQYPPISDGSNPPHGSAYPHQYPPISDGSHPPSSPYPHLNDLMSNVQISDNQPSAPVMTHSYSALNEGKKEEFYGHSSSNSFSGYEHSYSGLGGSPNLSAYPGSNDESVHSQSLQIVPAQYKGSLKYLLLHGNLDICVHSAKNLPNMDMFHKTLGDVFGKFPGNVGNKIEGTMTRKITSDPYVSISLSNAVVGRTFVISNSENPVWEQHFHVPVAHHASEVHFVVKDSDVVGSQLIGTVAIPVEQLYSGEKVQGTYPILNSNGKPCKPGAVLSVSIQFLPMEKLIIYHQGVGAGPNYIGVPGTYFPLRKGGTVTLYQDAHVPDGCLPNVMLDHGMHYVHGQCWLDMVDAIRQAKRLVYITGWSVWHKVRLVRDAPAGYGKTSDYTLGELLRSKSQEGVRVLLLVWDDPTSRSILGYKTDGVMATHDEETRRFFKHSSVQVLLCPRMAGKRHSWAKQQEVGTIYTHHQKTVIVDADAGNNFRKIVAFVGGLDLCDGRYDTPHHPLFRTLQTVHKDDYHNPTFTGNTGGCPREPWHDLHSKIDGPAAYDVLTNFEERWLRAAKPTGIKKLKSSYDDALLKIERIPDILRVSDAPSVGDDNPVAWHAQIFRSIDSNSVKGFPKEPRDGSIKNLVCGKNVLIDMSIHTAYVKAIRAAQHYIYIENQYFIGSSYNWSQNRDIGANNLIPMEIALKIAEKIKANERFAVYIVIPMWPEGVPTGAATQRILFWQNKTMQMMYETVYKALVEVGLEAAFSPQDYLNFFCLGNRETIDMHENISVSGIPPPPNTPQANSRNNRRFMIYVHSKGMIVDDEYVIIGSANINQRSMEGTRDTEIAMGAYQPEYTWARKHSYPRGQVHGYRMSLWAEHTGTIEDCFLQPESLDCVRRVRTMSEMNWKQFSSNDVTEMRGHLLKYPVEVDRKGKVRPLPGHEEFPDVGGKIVGSFIAIQENLTI* 1050
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1073 1049 SMART C2_3c 232 354 IPR000008 -
Mtr8g1073 1049 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 223 380 IPR035892 -
Mtr8g1073 1049 Pfam Phospholipase D Active site motif 896 922 IPR001736 GO:0003824
Mtr8g1073 1049 Pfam Phospholipase D Active site motif 561 595 IPR001736 GO:0003824
Mtr8g1073 1049 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 560 595 IPR001736 GO:0003824
Mtr8g1073 1049 MobiDBLite consensus disorder prediction 82 100 - -
Mtr8g1073 1049 MobiDBLite consensus disorder prediction 20 44 - -
Mtr8g1073 1049 MobiDBLite consensus disorder prediction 20 140 - -
Mtr8g1073 1049 SUPERFAMILY Phospholipase D/nuclease 715 981 - -
Mtr8g1073 1049 Gene3D Endonuclease Chain A 435 677 - -
Mtr8g1073 1049 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 895 922 IPR001736 GO:0003824
Mtr8g1073 1049 CDD C2_plant_PLD 227 378 - -
Mtr8g1073 1049 SUPERFAMILY Phospholipase D/nuclease 426 659 - -
Mtr8g1073 1049 MobiDBLite consensus disorder prediction 45 75 - -
Mtr8g1073 1049 Pfam C2 domain 231 357 IPR000008 -
Mtr8g1073 1049 PANTHER PHOSPHOLIPASE D 128 1049 IPR015679 -
Mtr8g1073 1049 ProSiteProfiles C2 domain profile. 216 355 IPR000008 -
Mtr8g1073 1049 Pfam Phospholipase D C terminal 969 1039 IPR024632 -
Mtr8g1073 1049 SMART pld_4 895 922 IPR001736 GO:0003824
Mtr8g1073 1049 SMART pld_4 560 595 IPR001736 GO:0003824
Mtr8g1073 1049 Gene3D Endonuclease Chain A 723 953 - -
Mtr8g1073 1049 Gene3D C2 domain 227 366 IPR035892 -
Mtr8g1073 1049 PANTHER PHOSPHOLIPASE D ALPHA 1 128 1049 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1073 Mtr-Chr8 13120487 13128560 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g1073 133 1049 Phospholipase D Gene Family (Wang group) AT2G42010 74.470 0.0 1441
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g1073 K01115 - gmx:100805294 1610.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g1073 8 13120487 13128560 Mtr8g1073 8 13120487 13128560 ECH