Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1072 ATGGCTAAAGAAAATTCTACAAACATTGATCTCACTCTTGGAGAGCCGAAAGAAGAACCGGAAATAGAAGATGTATCGGCGATAAAAGTTATGCCGATGACCATGCACGTGCCACCGGGGATACCTATGTCCATGCAAGTGAACAAAGCCTTGGTTCAAGCCCAAGCCCAAGCTCAAGCTCAAACCCAGGCCCAAGCTCAAGCTCAAGCCCAACAAACAATTCAAAAGAGATCATCTACAAAAGACCGTCACACAAAAGTCGAGGGTCGAGGCCGAAGGATCCGAATGCCTGCCACATGTGCAGCTCGGATCTTTCAGCTGACCCGAGAACTCGGACATAAGTCCGATGGCGAAACAATACGCTGGCTCCTCGAACACGCGGAGCCAGCTATCATTGCCGCCACCGGTACCGGCACAGTCCCAGCCATCGCCATGTCAGTCAACGGAACACTAAAAATCCCCACCACTTCCCCAACCAAAAACCCTAACCAAGAACCAAACCAACAATCCGATGAATCACCTGAGAAAAAGAAACGTAAACGACCATCAAACAGTGCTTACGTAGATATAAACGACACCACTGTTTCTGTTTCATCCGGTTTAATAACAACCTCAAACATAAACACAAACACAAACCTAAACCTAATTCCTCAACAACCCACAATTCAGTTACCACAAAACATGGTTCCTGTTTGGGCTATACCATCAAACGCTGTTGTACCAAACGGAAACACTTTTTTCGTTGTTCCAACAAATCAACCACAGTTTTTTACATTGGCTAGACCAATAACCGGTTTTGTTTCTTCCATGGTTACACCAGTTATTCAAGTTCAACAAGCTTCATGTTCTTTATCTCCTTCAACAAAGTCTCCAGCTAGAGCCACCGTGATGGCTCCAAGCACGGCGGCAACAACCACTACTCAGATGTTAAGGGATTTTTCATTGGAGATTTATGATAGACAAGAGCTTCAGTTATTATCAAGGTCTTCTTCGAAGCATTGA 1002 0.4511 MAKENSTNIDLTLGEPKEEPEIEDVSAIKVMPMTMHVPPGIPMSMQVNKALVQAQAQAQAQTQAQAQAQAQQTIQKRSSTKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDGETIRWLLEHAEPAIIAATGTGTVPAIAMSVNGTLKIPTTSPTKNPNQEPNQQSDESPEKKKRKRPSNSAYVDINDTTVSVSSGLITTSNINTNTNLNLIPQQPTIQLPQNMVPVWAIPSNAVVPNGNTFFVVPTNQPQFFTLARPITGFVSSMVTPVIQVQQASCSLSPSTKSPARATVMAPSTAATTTTQMLRDFSLEIYDRQELQLLSRSSSKH* 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1072 333 MobiDBLite consensus disorder prediction 68 94 - -
Mtr8g1072 333 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 28 331 IPR005333 GO:0003700
Mtr8g1072 333 Coils Coil 51 71 - -
Mtr8g1072 333 MobiDBLite consensus disorder prediction 1 20 - -
Mtr8g1072 333 Pfam TCP family transcription factor 79 181 IPR017887 -
Mtr8g1072 333 MobiDBLite consensus disorder prediction 170 185 - -
Mtr8g1072 333 MobiDBLite consensus disorder prediction 151 169 - -
Mtr8g1072 333 MobiDBLite consensus disorder prediction 77 93 - -
Mtr8g1072 333 PANTHER TRANSCRIPTION FACTOR TCP9 28 331 - -
Mtr8g1072 333 MobiDBLite consensus disorder prediction 151 188 - -
Mtr8g1072 333 ProSiteProfiles TCP domain profile. 80 134 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1072 Mtr-Chr8 13113209 13114786 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g1072 76 332 TCP Transcription Factor Family AT2G45680 54.754 8.74e-82 250
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Mtr8g1072 TCP 6.9e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g1072 - - cam:101488699 473.011
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g1072 8 13113209 13114786 Mtr8g1072 8 13113209 13114786 ECH