Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1060 ATGGCTTCCCTCACAGATCAATTCAAGTACGATGTTTTTCTCAGCTTTCGAGGTGAGGATACTCGCTACGGTTTCACTGGCAATCTCAAGAAAGCTCTAGATGACAAAGGAGTTCGAACTTTCATGGATGACAAGGAGATTAAAAAAGGCGAAGAAATCACACCATCACTTCTCAAAGCAATTGAAGACTCCAAGATGGCCATCGTTGTCCTCTCTAAGAATTATGCTTCTTCCTCCTTTTGCTTACAAGAGCTTTCAAAGATCCTTGATACGATGAAAGATAAGGTGGTGGATCGTTCCGTTTTGCCGGTTTTTTATAAGGTGGATCCTTCTGATGCAAGAAAGTTGAAAAGCAGCTATGGAGAAGCACTGGCTCAACATGAGAAAAGGTCAAATAGTAACATGGATTTGTTGCAGAAATGGAAGAATGCTCTAAACCAAGTTTCTAATTTATCCGGCTTTCATTACAAGAAAGGGGATGGGTACGAGCATGAGTTTATTGGAAAGATTGTTGAACAAATCTTAAGAAATACAAAACCCGTTGCATTACCTGTTGGTGATTACCTAGTTGGACTGGAGCACCAAAAGCAACATGTGACTTCGCTTTTGAATGTTGGGTCTGATGATACTGTCCACATGGTAGGGATCCATGGGATTGGTGGAATAGGGAAAACTACTCTTGCTCTAGAAGTTTATAATTCAGTTGTCTGTCTATTTCAAGGTTCCTGTTTTCTTGAAAAAGTTAGAGAAAATTCTGAGAAAAATGGGTTGATATATCTCCAAAAGATCCTTCTGTCTCAAATTCTTGGAGAGAAGGACATGGAGTTAACAAGTGTTGGACAAGGAATGTCAATATTACAACAAAGGCTCCGCCAAAAGAAGGTTCTTTTGCTTCTAGACGATGTTGACAATTTGGAGCAATTAGAGGCCGTTGCTGGAAGATCTGTTTGGTTTGGACAAGGCAGCAGAGTCATCATTACGACTCGAGACAAAAGGTTACTAACAAGGCATGAGGTTGAAAGAACATACGAAGTGAAGGGATTGAATGATAAAGATGCTTTTGAATTGGTGGGATGCAAAGCTTTAAAAAACAAATATAGTCCAAGCTATAAAGATATGTTATTAGTTGAAAATTATGGAAGACAATTAGTGGATGTGAACGACCAAGTTTATTCAGGTTACACGCATGTTTTAAAACGTGCCGTAGCATATGCTTCTGGCCTTCCACTAGCTTTGGAAGTCATAGGTTCTCACTTTTTTAATAAGACAGTAGAGCAATGTGAATGTGCACTAGATCGTTATGAAAGAGTTCCTCATAAAAAGATCCAAACAACACTACAACTGAGCTTTGATGCTTTGCAGGAAGAAGAGAAGTCTGTTTTTCTTGATATTGCTTGTTGCTTCAAAGGATGGAAATTGACAAGGGTCGAAGAAATACTTCATGCTCATCATGGTGATATCATGAATGATCACATTAATGTGTTAGCAGAAAAATCTCTCATAAAAATAAGTGAGTCTGGTAATGTGACATTACATGATTTGGTAGAGGATATGGGGAAAGAAATAGTTAGACAAGAATCACCGGAAAATCCTGGAAAACGTAGTAGGTTATGGTCCTCTAAAGATTTAATTCAAGTTTTAGAAGAAAATACTGGAACAAGTAAAATTGAAATCATACATTTGGATTGTTCTATTAGAGTAGAATGGGATGAAGAAGCTTTCAAGAAGATGGAAAATCTCAAAACACTAATTTTTAGTAAAGATGTTTCTTTTTCTAAAAATCCCAAACATCTTCCAAATAGTCTAAGAGTGTTGGAATGTCGCTATCGCAAGTATCCTTCATCAAATTTCCATGTGCAAGATGAAAAATGCCATTTTTTCAGTCACCATACATCAAATCCATTTGAGTGGAAGGGCTTATTCAGAAAGAAGTTCAAGAATATGAGAATTTTAAATCTTCAGCATAGTGAAGGTTTAGCAGAAATACCTGATATATCTGATCTTTCAAATTTAGAAGAATTTTCAATTCAAGATTGTGAGGAACTAATTACAATTGATAACTCGGTTGGTTTTTTGCGTAAACTTAAAACCATGAGTATTAGAGGTTGCCATGAGTTAAGGAGACTTCCACCTCTCAAGTTGGATTCGCTAGAAAAACTTGACCTTTCAAATTGTTATATGCTCGAGAGTTTTTCAAGTGTGGCGGATGGGTTGTTGGATAAACTTAAATTCTTGAATATTGAATACTGCATCATGCTTAGGAGTATTCCACGGCTCACGTTGACTTCTTTAGAACATTTCAATATTTCATGTTGTTATAGTCTTGAGAGTTTACCAGAAATATTGGAAGATCTGAGAAATATACCAGGACTTCGCTTGGATAAAACTTCCATAAAAGAATTGCCGTCTCCATGTAATTGTGAATATTTTAGGTCACCAAATATAGCTGATGTGAAGCCAAAACTGGTTGAATTTGCCATCCATAATGAAGAAAGAGTACTCCTGCAATCTTCAAATGTAAAGTATATTTGTGTGGGAAACTGCAAACTTTCATATGAAAATCTGTCAAAAATTCTCATCTTGTTTTCTAATGTGCAAGAATTACACCTAACTAACTATCAATTCAAAGTTCTTCCTAATTGTATCGAAGAATGTCATTTTTTATGGAAACTCGTCTTGGATGATTGTAAGGAACTTCAGGAAATTAAAGGGATTCCTCCACGCTTAAGAATGTTATCTGCACTAAACTGCAAGTCATTGACTTCGTCGTGCAAAAGCAAATTACTAAATCAGGAATTGCACGAGGCTAGAAACACTTGGTTTCGTTTGCCACGGGTGCCAAAGATTCCAGAGTGGTTCGACCACAAATGCTCGGCAGGATTGTCAATTTCTTTTTGGTTTCGTAACAAGTTTCCCTCCATAGTTCTTTGTGTTGTTTCTCCATTGACATTGTGTTTTGGACATCAGGGTGGTGTAAGAGTGATCATTAACGGCAATAGATTTGTCTATACATATAGTTCGGTGATACATTGGAGAGCACAGCCCAATATGTATCATTTGCATCTTTTTCATATGCAAATGGAGAACTTCAATGATAATATGGACAAAGCACTTTTAGAAAATAAGTGGAACCATGCAGAGGTTTATTTTGGTGTCTCTGCATTCATGTATAGTGGAATCCATGTATTGAAAGATAAAAACAACATGGAGGATATTCGATTCACCAACCCAGCGAGTGATGCTAACATTGTGTTACACTCGGAATGTTAA 3270 0.3685 MASLTDQFKYDVFLSFRGEDTRYGFTGNLKKALDDKGVRTFMDDKEIKKGEEITPSLLKAIEDSKMAIVVLSKNYASSSFCLQELSKILDTMKDKVVDRSVLPVFYKVDPSDARKLKSSYGEALAQHEKRSNSNMDLLQKWKNALNQVSNLSGFHYKKGDGYEHEFIGKIVEQILRNTKPVALPVGDYLVGLEHQKQHVTSLLNVGSDDTVHMVGIHGIGGIGKTTLALEVYNSVVCLFQGSCFLEKVRENSEKNGLIYLQKILLSQILGEKDMELTSVGQGMSILQQRLRQKKVLLLLDDVDNLEQLEAVAGRSVWFGQGSRVIITTRDKRLLTRHEVERTYEVKGLNDKDAFELVGCKALKNKYSPSYKDMLLVENYGRQLVDVNDQVYSGYTHVLKRAVAYASGLPLALEVIGSHFFNKTVEQCECALDRYERVPHKKIQTTLQLSFDALQEEEKSVFLDIACCFKGWKLTRVEEILHAHHGDIMNDHINVLAEKSLIKISESGNVTLHDLVEDMGKEIVRQESPENPGKRSRLWSSKDLIQVLEENTGTSKIEIIHLDCSIRVEWDEEAFKKMENLKTLIFSKDVSFSKNPKHLPNSLRVLECRYRKYPSSNFHVQDEKCHFFSHHTSNPFEWKGLFRKKFKNMRILNLQHSEGLAEIPDISDLSNLEEFSIQDCEELITIDNSVGFLRKLKTMSIRGCHELRRLPPLKLDSLEKLDLSNCYMLESFSSVADGLLDKLKFLNIEYCIMLRSIPRLTLTSLEHFNISCCYSLESLPEILEDLRNIPGLRLDKTSIKELPSPCNCEYFRSPNIADVKPKLVEFAIHNEERVLLQSSNVKYICVGNCKLSYENLSKILILFSNVQELHLTNYQFKVLPNCIEECHFLWKLVLDDCKELQEIKGIPPRLRMLSALNCKSLTSSCKSKLLNQELHEARNTWFRLPRVPKIPEWFDHKCSAGLSISFWFRNKFPSIVLCVVSPLTLCFGHQGGVRVIINGNRFVYTYSSVIHWRAQPNMYHLHLFHMQMENFNDNMDKALLENKWNHAEVYFGVSAFMYSGIHVLKDKNNMEDIRFTNPASDANIVLHSEC* 1090
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1060 1089 Gene3D - 177 342 IPR027417 -
Mtr8g1060 1089 PANTHER ARCHAEAL ATPASE 20 1051 - -
Mtr8g1060 1089 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 20 1051 IPR044974 GO:0006952
Mtr8g1060 1089 SUPERFAMILY "Winged helix" DNA-binding domain 440 548 IPR036390 -
Mtr8g1060 1089 Gene3D Ribonuclease Inhibitor 760 939 IPR032675 -
Mtr8g1060 1089 Gene3D Ribonuclease Inhibitor 526 759 IPR032675 -
Mtr8g1060 1089 ProSiteProfiles TIR domain profile. 8 178 IPR000157 GO:0007165
Mtr8g1060 1089 SMART till_3 9 151 IPR000157 GO:0007165
Mtr8g1060 1089 Pfam NB-ARC domain 196 442 IPR002182 GO:0043531
Mtr8g1060 1089 SMART AAA_5 210 348 IPR003593 -
Mtr8g1060 1089 Pfam TIR domain 9 179 IPR000157 GO:0007165
Mtr8g1060 1089 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 184 464 IPR027417 -
Mtr8g1060 1089 Gene3D - 7 176 IPR035897 -
Mtr8g1060 1089 Gene3D - 381 454 IPR042197 -
Mtr8g1060 1089 SUPERFAMILY Toll/Interleukin receptor TIR domain 4 154 IPR035897 -
Mtr8g1060 1089 PRINTS Disease resistance protein signature 213 228 - -
Mtr8g1060 1089 PRINTS Disease resistance protein signature 289 303 - -
Mtr8g1060 1089 PRINTS Disease resistance protein signature 405 419 - -
Mtr8g1060 1089 PRINTS Disease resistance protein signature 712 728 - -
Mtr8g1060 1089 SUPERFAMILY L domain-like 559 954 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1060 Mtr-Chr8 13019382 13025753 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g1060 10 803 WRKY Transcription Factor Family AT4G12020 27.619 6.74e-67 245
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g1060 - - mtr:MTR_0012s0290 1285.01