Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1053 ATGGCAAAAAAGTATGAAGGAGTTGCTATAGGAATTGATCTTGGCACAACTTACTCATGTGTTGGAGTATGGCAAGAGCAAACTGATCGTGTGGAAATAATTCACAATGATCAAGGAAACAAAACAACACCTTCTTGTGTTGCTTTTACTAATTCTCAGAGATTGATTGGTCATGCTGCCAAAAATCAAGCTTCCTCTAACCCCACCAACACTATCTTTGATGCAAAGAGGTTAATTGGAAGAAAGTATAGTGACTCCATAGTTCAGAAGGATCAACTGTTGTGGCCATTTAAGGTCACTGCTGGTGCTAATGACAAACCGAAGATCCTTGTGAACTACAATGGGAAGGAACATCACTTTGTTGCTGAAGAAATATCCTCTATGATTCTATCACAGATGCGAGAGATTGCAGATGCATTTCTTGAGTCACCTGTTAAGAATGCAGTGATTACGGTGCCAGCGTATTTCAATGATTCGCAGCGACGAGCCACCAAGGATGCTGGTGTCATTGCTGGCCTCAATGTAATACGGATAATCAACGAACCAACTGCAGCTGCTCTTGCATATGGCATTCAAAAGAGAGCTAATTGTCTTGAAGAGAGAAGGATTTTTATTTTTGACCTTGGCGGTGGAACTTTTGATGTGTCTCTTCTTACAGTAAAGAATAATGTCTTCGAAGTCAAGGCCACTGCCGGAGACACTCACCTTGGAGGAGAGGACTTTGATAATCGAATGGTGAATCACTTTGTGAAAGAGTTTAAGAGGAAGAACAAAGTTGACATTATTGGGAACTCAAAAGCCCTAAGGAGATTGAGAACTAACTGCGAGAAGGCGAAAAGGACACTTTCATACGATACAGAGGCTACAATTGACATAGATGCTATATGTGAGGGCATTGACTTCTGCTCATCAATCACTCGAGCCAAGTTCGAGCAACTGAATATGGACCTCTTTGAAAAGTGTATGGAGACCGTTGAAAGTTGTTTGACCGATGCTAAGATGGACAAGAGTAGTGTAGATGATATTGTACTTGTTGGTGGCTCGTCTAGGATTCCCAAAGTGAAGCAGCTATTGCAGGAGTTTTTCAAGGGCAAGGAGTTATACAAGAGCATCAACCCTGATGAGGCTGTTGCTTATGGTGCCGCTGTTCAGGCTGCTTTGTTGAGTGAAGGCATGAAGACTGTTCCGAAAGTGACGCTGCAAGATGTTATACCTTTGTCTCTTGGTTTTTCTATAAAAGGAGATCTTATGGATGTTATGATTCCTAGGAACACTTGCATCCCTGTCAAGAAGACAGGTAGATATGTTACTGCATATGATAACCAAACTGGAGTCCGAATTCATGTTTATGAGGGCGAGAGAATGATAGCTAGCGAAAACAACTTGCTTGGTTTCTTTCGTCTTTCAGTTCCTCATGCACCTCGTTACCTTCCTGTCCAAGTATGCTTTGCTATAGATGCTGACGGTATATTAAAAGTCTCTGCGAAGGAAAAAACCAGTGGTAATAAGAAAGATATTACAATAACAAATGAAAATGGAAGATTATCAAGTGAAGAAATTGGGAGAATGATCCAGGAAGCTGAGAATTTCAAGGCTGAAGATATGAAGTTCAAAAAGAAAGTTAAAGCAATCAATGCTTTGGATGACTATCTTTACCATGTGAGGAAAATCATGAAGGATAATTGTGTTAGTTCCATGCTGACACCTGTAGACAAAATTTTGATAGATTCTGCAATGATAAAGGGAAAAAGCTTGATTGATGGAAACAAGCAGGAAGATACATTTGTGTTTTTGGACTTTTTGAAGGAGCTTGAGAGCATCTTTGGATCTGCTTTGAATAAGATCAACAAAGGTTACTCCGGTGAAGAAAGTGATTCTGATTCTTAA 1887 0.4022 MAKKYEGVAIGIDLGTTYSCVGVWQEQTDRVEIIHNDQGNKTTPSCVAFTNSQRLIGHAAKNQASSNPTNTIFDAKRLIGRKYSDSIVQKDQLLWPFKVTAGANDKPKILVNYNGKEHHFVAEEISSMILSQMREIADAFLESPVKNAVITVPAYFNDSQRRATKDAGVIAGLNVIRIINEPTAAALAYGIQKRANCLEERRIFIFDLGGGTFDVSLLTVKNNVFEVKATAGDTHLGGEDFDNRMVNHFVKEFKRKNKVDIIGNSKALRRLRTNCEKAKRTLSYDTEATIDIDAICEGIDFCSSITRAKFEQLNMDLFEKCMETVESCLTDAKMDKSSVDDIVLVGGSSRIPKVKQLLQEFFKGKELYKSINPDEAVAYGAAVQAALLSEGMKTVPKVTLQDVIPLSLGFSIKGDLMDVMIPRNTCIPVKKTGRYVTAYDNQTGVRIHVYEGERMIASENNLLGFFRLSVPHAPRYLPVQVCFAIDADGILKVSAKEKTSGNKKDITITNENGRLSSEEIGRMIQEAENFKAEDMKFKKKVKAINALDDYLYHVRKIMKDNCVSSMLTPVDKILIDSAMIKGKSLIDGNKQEDTFVFLDFLKELESIFGSALNKINKGYSGEESDSDS* 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1053 628 PANTHER HEAT SHOCK 70 KDA PROTEIN 4 616 - -
Mtr8g1053 628 PANTHER HEAT SHOCK PROTEIN 70KDA 4 616 IPR013126 GO:0005524|GO:0140662
Mtr8g1053 628 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Mtr8g1053 628 Pfam Hsp70 protein 9 592 IPR013126 GO:0005524|GO:0140662
Mtr8g1053 628 SUPERFAMILY Actin-like ATPase domain 200 388 IPR043129 -
Mtr8g1053 628 SUPERFAMILY Actin-like ATPase domain 8 193 IPR043129 -
Mtr8g1053 628 Gene3D - 515 618 IPR029048 -
Mtr8g1053 628 Gene3D - 194 368 - -
Mtr8g1053 628 PRINTS 70kDa heat shock protein signature 8 21 - -
Mtr8g1053 628 PRINTS 70kDa heat shock protein signature 38 50 - -
Mtr8g1053 628 PRINTS 70kDa heat shock protein signature 60 68 - -
Mtr8g1053 628 PRINTS 70kDa heat shock protein signature 148 168 - -
Mtr8g1053 628 PRINTS 70kDa heat shock protein signature 211 221 - -
Mtr8g1053 628 PRINTS 70kDa heat shock protein signature 339 355 - -
Mtr8g1053 628 PRINTS 70kDa heat shock protein signature 371 391 - -
Mtr8g1053 628 PRINTS 70kDa heat shock protein signature 397 416 - -
Mtr8g1053 628 PRINTS 70kDa heat shock protein signature 476 492 - -
Mtr8g1053 628 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 385 513 IPR029047 -
Mtr8g1053 628 ProSitePatterns Heat shock hsp70 proteins family signature 3. 342 356 IPR018181 -
Mtr8g1053 628 Gene3D - 10 384 - -
Mtr8g1053 628 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 395 548 IPR029047 -
Mtr8g1053 628 Gene3D - 73 128 - -
Mtr8g1053 628 Gene3D Actin; Chain A, domain 4 237 320 - -
Mtr8g1053 628 ProSitePatterns Heat shock hsp70 proteins family signature 2. 205 218 IPR018181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1053 Mtr-Chr8 12958707 12961383 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g1053 1 618 Calmodulin-binding Proteins AT3G12580 66.023 0.0 820
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g1053 K03283 - gmx:102667572 836.639