Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1047 ATGGAGGAGTATCACATAAAGGCAATGGAAGAGGTCATGAGAGGGTGTGAGTTTGCTGAGCAGCTTCAGCAATTACTGCTCAATAATAATACTAATAATTTGATGAAAACACCAACCTCAATATTTGTTCAACATCTTGTCAACAATGTCATCAACTCATTTAACAATACCATATTTCTCATGAGCAAAGGAAACCCTAGTGACCAAATTCAAAAGGAATTTTCTTCCATTGCTCCAGTAGTTAGATCTGTCGACTTCAAAGAAAATTGGAAGAAGACTTCTGCAACTAGAGGATGTAACAAAAGAAGAAACATTACACAAACATGGGAGAAGGTGACACAAACTCCAACAGATGATGATGGGCATCAATGGAGAAAATATGGCAAAAAAAAGATCAACAATTCTCCATACTTAAGGAACTACTACAGGTGTACTCACAAGTTTGATCAAAGATGCCTAACAACCAAGCATGTGCATAGAATTCAACAAAAACCTCCCTTGTATAAGACAACCTATTATGGTCACCACACTTGTGGAAACTTGCCCAACCCTGACATCATACTTGATCCTAATGACACTTCTTCCTTGTTACTTAGCTTTAATAATACATTCCCAACTCCAACAAAACAAGAATGTCCCTTTTTGTCATCACCATCATCTTTTTCTTCAACACATTCAGAGGAGTATAACGATGAAGTTCCTTCATCAACCTTAGTGAATACTAACCTGCCTTGCTCTGATCTCACTTTACATAATTCTACACTTGAATATGGTCACAATGATATGATGCATGGTTTATTGTATGATACTGTTCAGTTTAATGATGATTTCTTTCAACCTTTTGATGGCTTCGTAGTGGAATAA 864 0.3646 MEEYHIKAMEEVMRGCEFAEQLQQLLLNNNTNNLMKTPTSIFVQHLVNNVINSFNNTIFLMSKGNPSDQIQKEFSSIAPVVRSVDFKENWKKTSATRGCNKRRNITQTWEKVTQTPTDDDGHQWRKYGKKKINNSPYLRNYYRCTHKFDQRCLTTKHVHRIQQKPPLYKTTYYGHHTCGNLPNPDIILDPNDTSSLLLSFNNTFPTPTKQECPFLSSPSSFSSTHSEEYNDEVPSSTLVNTNLPCSDLTLHNSTLEYGHNDMMHGLLYDTVQFNDDFFQPFDGFVVE* 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1047 287 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 1 278 IPR044810 GO:0003700
Mtr8g1047 287 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 1 278 - -
Mtr8g1047 287 Gene3D WRKY domain 102 182 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mtr8g1047 287 SMART WRKY_cls 118 180 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mtr8g1047 287 Pfam WRKY DNA -binding domain 119 178 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mtr8g1047 287 ProSiteProfiles WRKY domain profile. 113 176 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mtr8g1047 287 SUPERFAMILY WRKY DNA-binding domain 113 179 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1047 Mtr-Chr8 12896622 12899006 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g1047 6 199 WRKY Transcription Factor Family AT3G56400 29.817 7.05e-24 96.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mtr8g1047 WRKY 6.3e-21 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g1047 - - mtr:MTR_8g032510 585.874