Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1026 ATGTTAGCGGAAGAGGCTGACGACTGGTGGGTGAGTTTGTTGCCTGTGTTGGAACAGGATGATGCTGTGGTAACCTGTACTGTGTTCAGGAAGGAGTTTCTGGACAGTATCCGAGAAGCTCAGAAAGCAGATTTGAAATTGGTTGATTTGATGACTACTGGTAGTGACACTGAGGACAGTGATTTTAAGGTTGATGATCAGGGTGTTTTGAGGAATATTAGTATGGAGATGGATGATAATGAAGTTGACTGTGATTCACCTATAGAAGAAGAATTTGATGAGTTAGCAAACAAGTCGGAGGAATGGATTCCAAACTGTGATGCAGAGCTAAAACCTGTGATTGGTAAGGTATTTGATACTTTAAAAGAAGGGGATGATTTCTATAAAAATTATGCTTATGTTGCTGGTTTTAGTGTGCGTAATTCAACTGAAACAAAAGATAAAATTGGTGTCAGATGGAAATATTTTCTTTGCTCAAAGGAGGGATTTAAAGTGGAAAAAAAGGTAGATGAGCCTGAATTGCTTATTAGTGATGATTATTTGCCTAAAGGAAGAAAAAGAAATTTGACACGAGAGGGATGTAAAGCAAGGATTGTGTTCAAGAGAACTGATGAGGGGAAGTTAAAATATGTGTTTTGGGCTGATGGCATTAGTCGAAAAAATTATTCTTTATTTGGAGATGTAGTTTCATTTGACACTACATATAGTACAAATAAATATCATCAGATTTTTGTATCATTCACCGGTGTGAATCATCATCGTCAAAGCATAACTTTTGGTGCTGCATTTTTAAATGATGAAAAAGAAGAGTCATTTGTGTGGTTGTTTGAGACTTTTTTGAAGGCAATGGGTGGGAATAAACCTGTTATGATAATAACAGATCAAGACCAGGCTATGACAAATGCAATTGAAAGCATTTTTAAGGGGTCTTCTCATAGATTTTGCATGTGGCATATTCTCAAAAAACTTTCAGAAAAGGTGGGTGGCACCTTGAATGATAATAATGATTTCAATAATCGTTTCAATTCATGTGTTTGGAACTTAGAGTCCTCTGAAGAATTTGAATTTGAATGGAATGATATTATTAATGATTTTGGGTTGGAAGAAAATGGTTGGCTTTCTACAATGTATGAACTTAGACGCATGTGGATACCAGCTTATTTTAAAGATATATTTATGGCTGGAATTTTGAGAACAACCTCAAGATCAGAGAGTGAAAATTCATTCTTTGGACACTTTTTGAATAACAAGCTTAATTTGGTTGAATTTTGGATGCGCTTTGATTCTGCTTTAGAAGCACAGAGGCACAAAGAACTTCTGGCAGATAATGCTACACTTCATTCTATTCCAGCATTGAAGATGCACGTGGATTTAGAGAAGCATGGTAGAGAGATTTATACTCATGAAATTTTTTACATATTTCAGAGTGAGTTATGGAATTCATGTGTAAATTGCGGCATTGAAGGAACAAAACAAGAAGGTGATAATTTAATTTTTTATATACTTGATAATGTTGTGGTCAATAAAACAAAGGTGACCAAACATAGAGAGGTTGCTTTGAGTCTTTCTAATAACATTGCACATTGTTCATGCAAAATGTTTGACTCTGAAGGTATTCCATGCCGACATATTCTTTCTGTATTAATGGGGAAAGGTTTTAGTAAAATTCCAAGTCATTACATTGTCAATAGATGGACTAAATTGGCAACAAGTAGACCGGTATTTGATTGTGATGGAAATGTATTGGAGGCATGTTCTAAAGCTGAAAGTGAGAAGATATTAATTTCAAAAGCATGGGCACAGATGTTTAAATGCATGCATATGGCTGGTACAAATAAAGAGAAATTGCTCCTTGTTTACAAAGAAGGTTGTAGTATTGAATCGAAATTGTCTAATATGAGGAGCGATGTTGAATCAACACCCTCCGATGATGTGGAGGCTTTTATTGGATCCAATGTACCTAAAAAAATTCATGTTCTTCCACCTGAACCGTCAAATACCAAAGGTTGTGGAAAACGGATTAAAGGGGGAAAAGAGAAGGCAATAGAGCAACAACAAAAGAGAACAAGGCTTTGTAAAACTTGTAAGCGATTCGCATCCCACGATAGTCGCAATTGTCCCACAAAATCCTCTTCATAG 2139 0.3576 MLAEEADDWWVSLLPVLEQDDAVVTCTVFRKEFLDSIREAQKADLKLVDLMTTGSDTEDSDFKVDDQGVLRNISMEMDDNEVDCDSPIEEEFDELANKSEEWIPNCDAELKPVIGKVFDTLKEGDDFYKNYAYVAGFSVRNSTETKDKIGVRWKYFLCSKEGFKVEKKVDEPELLISDDYLPKGRKRNLTREGCKARIVFKRTDEGKLKYVFWADGISRKNYSLFGDVVSFDTTYSTNKYHQIFVSFTGVNHHRQSITFGAAFLNDEKEESFVWLFETFLKAMGGNKPVMIITDQDQAMTNAIESIFKGSSHRFCMWHILKKLSEKVGGTLNDNNDFNNRFNSCVWNLESSEEFEFEWNDIINDFGLEENGWLSTMYELRRMWIPAYFKDIFMAGILRTTSRSESENSFFGHFLNNKLNLVEFWMRFDSALEAQRHKELLADNATLHSIPALKMHVDLEKHGREIYTHEIFYIFQSELWNSCVNCGIEGTKQEGDNLIFYILDNVVVNKTKVTKHREVALSLSNNIAHCSCKMFDSEGIPCRHILSVLMGKGFSKIPSHYIVNRWTKLATSRPVFDCDGNVLEACSKAESEKILISKAWAQMFKCMHMAGTNKEKLLLVYKEGCSIESKLSNMRSDVESTPSDDVEAFIGSNVPKKIHVLPPEPSNTKGCGKRIKGGKEKAIEQQQKRTRLCKTCKRFASHDSRNCPTKSSS* 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1026 712 Pfam MULE transposase domain 228 322 IPR018289 -
Mtr8g1026 712 Pfam FAR1 DNA-binding domain 126 209 IPR004330 -
Mtr8g1026 712 MobiDBLite consensus disorder prediction 664 684 - -
Mtr8g1026 712 ProSiteProfiles Zinc finger SWIM-type profile. 516 552 IPR007527 GO:0008270
Mtr8g1026 712 SMART 26again6 527 554 IPR006564 GO:0008270
Mtr8g1026 712 Pfam SWIM zinc finger 521 548 IPR007527 GO:0008270
Mtr8g1026 712 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE ISOFORM X1 104 206 - -
Mtr8g1026 712 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE ISOFORM X1 204 582 - -
Mtr8g1026 712 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 104 206 IPR031052 GO:0006355
Mtr8g1026 712 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 204 582 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1026 Mtr-Chr8 12376268 12387667 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mtr8g1026 MULE 6.3e-30 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g1026 - - soe:110798711 578.941