Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1025 ATGAATATGATGAGAAGACTCAAGAGCATTGCTTCTGGAAGAACTTCTATTTCTTCAGATCCTGGAGGGGATTCTAATTCGAAAAGAGTTAAGCTTGATCAAGAAACTGAAAAGGCTTATGAAGGGACAAATACATTAGACAGAAATGATCGGGAGCAGCGTGTGGATTCGTCAAATGAAGCAACAGTTGGTACATCCAATGAAGTATCTGCAATAACTAAAACTGAGAAGAAGTCGGGTTTTGATGAACTTCCAAAAGAGTTACATGAAATGAAAATTAGAGATGAGAAAAGCAAAAACAACAATGAAAAGGATATAGAAGCAACTACAGTGAGTGGCAATGGAACAGAAACAGGTCAAATTATTACAACCACTATTGCTGGTCGAGATGGACAACCGAAACAGACAATCTCATACATGGCCGAACGCGTAGTTGGGACCGGCTCTTTTGGCGTTGTTTTTCAGGCCAAGTGCCTTGAAACCAATGAAGCAGTTGCGATAAAAAAGGTGCTGCAAGACAAGAGATATAAGAATAGGGAACTCCAGGTTATGCGCATGGTTGACCATCCGAACATTGTTAAGTTGAAGCACTGTTTCTATTCAACAACTGAGAAAGATGAATTGTACCTTAACCTTGTTTTGGAATATGTACCTGAAACTGTTTACAAAGTTTCAAAGAACTATATTCGGATGCACCAACATATGCCTATCATTCACGTGCAACTGTATACATACCAGATTTTACGTGGATTAAATTATTTACATGAAGTGATCGGCGTCTGTCATCGAGACATCAAACCTCAGAACCTATTGGTCAATGCACAGACACATCAGTTAAAGATATGTGATTTCGGGAGTGCAAAGATGTTGGTGCCTGGTGAACCCAACATATCATACATTTGTTCTAGATATTATAGAGCTCCCGAACTAATATTTGGAGCAACTGAATACACGACTGCTATTGATATGTGGTCTGTCGGTTGTGTTTTGGCTGAGCTCCTTCTAGGACAGGCAATGTTTCCTGGAGAGAGTGGGGTTGATCAGCTAGTGGAGATTATCAAGGTATTGGGAACGCCAACAAGAGAAGAAATAAGGTGCATGAATCCAAACTACAATGAATTTAAGTTCCCTCAGATTAAAGCGCACCCGTGGCACAAGCTTTTTCACAAGAGAATGCCATCTGAAGCAGTGGATTTAGTTTCAAGGTTGCTTCAGTATTCACCACATCTACGTTGCACTGCTTTAGCTGCATGTGCACATCCGTTTTTCAACGATCTGCGAGACCCAAATGCAAGCTTGCCAAATGGACAACCACTACCTCCTTTGTTCAACTTCACACCGCAAGAACTCGTAAATGCACCTGAAGATTTGCGTCAACGTCTCATTCCCGAACATGCAAGGAGTTAA 1407 0.4094 MNMMRRLKSIASGRTSISSDPGGDSNSKRVKLDQETEKAYEGTNTLDRNDREQRVDSSNEATVGTSNEVSAITKTEKKSGFDELPKELHEMKIRDEKSKNNNEKDIEATTVSGNGTETGQIITTTIAGRDGQPKQTISYMAERVVGTGSFGVVFQAKCLETNEAVAIKKVLQDKRYKNRELQVMRMVDHPNIVKLKHCFYSTTEKDELYLNLVLEYVPETVYKVSKNYIRMHQHMPIIHVQLYTYQILRGLNYLHEVIGVCHRDIKPQNLLVNAQTHQLKICDFGSAKMLVPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSVGCVLAELLLGQAMFPGESGVDQLVEIIKVLGTPTREEIRCMNPNYNEFKFPQIKAHPWHKLFHKRMPSEAVDLVSRLLQYSPHLRCTALAACAHPFFNDLRDPNASLPNGQPLPPLFNFTPQELVNAPEDLRQRLIPEHARS* 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1025 468 Gene3D Transferase(Phosphotransferase) domain 1 219 467 - -
Mtr8g1025 468 SMART serkin_6 139 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g1025 468 ProSitePatterns Protein kinases ATP-binding region signature. 145 169 IPR017441 GO:0005524
Mtr8g1025 468 SUPERFAMILY Protein kinase-like (PK-like) 138 450 IPR011009 -
Mtr8g1025 468 ProSiteProfiles Protein kinase domain profile. 139 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g1025 468 PANTHER SHAGGY-LIKE KINASE 6 468 - -
Mtr8g1025 468 MobiDBLite consensus disorder prediction 1 68 - -
Mtr8g1025 468 CDD STKc_GSK3 134 426 IPR039192 -
Mtr8g1025 468 MobiDBLite consensus disorder prediction 9 25 - -
Mtr8g1025 468 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 6 468 - -
Mtr8g1025 468 Pfam Protein kinase domain 139 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g1025 468 ProSitePatterns Serine/Threonine protein kinases active-site signature. 260 272 IPR008271 GO:0004672|GO:0006468
Mtr8g1025 468 Gene3D Phosphorylase Kinase; domain 1 123 218 - -
Mtr8g1025 468 MobiDBLite consensus disorder prediction 92 116 - -
Mtr8g1025 468 MobiDBLite consensus disorder prediction 26 57 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1025 Mtr-Chr8 12369222 12373579 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g1025 139 459 MAP Kinase Gene Family AT1G73670 36.310 4.52e-55 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Mtr8g1025 Pkinase 7.4e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g1025 K00924 - gmx:100811346 812.757
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g1025 8 12369222 12373579 Mtr8g1025 8 12369222 12373579 ECH