Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1007 ATGGCTTCTTCTTCATCATCTTCTCCTCACAAAAAACACGATGTTTTTATCAGTTTTAGAGGGGAAGACACTCGCGCCAATTTTACAAGCTTTCTTCATGCGGCTTTGTGTAAAAACCACATCGAAACCTACATAGACTATAGGATCAAAAAAGGAGAAGAGGTTTGGGAAGAACTTGAAAAAGCAATTAAAGCATCCGCTTTATTTTTGGTTGTGTTCTCAGAAAACTATGCATCTTCAACATGGTGTTTGAATGAACTCGTTGAAATAATGAAGTGCAAAAAAAATGACGAAGACAACGTTGTTGTTATTCCTGTGTTCTACCGTATAGAACCTTCACACGTCCGAAAGCATACAGGAAGTTACCAAACGGCGTTGGCGAAACAAAAGAAACAAGGCAAAGATATGATTCAAAGGTGGAAGAATGCTCTCTTTGAAGTAGCTAATTTATCTGGCTTCGATTCAAGTACATATAGGACTGAAAATGACTTGATTGAAGACATCATCAAAGTAGTTTCCCAAAATCTGAATCAAAAGTATACCAATGAACTTAGATGTTTGTTCATACCAGATGAAAACTATTCAAGCATTGAATCATTATTAAAAAATGATTCAAGCGAAGTTAGAACTATTGGAATTTGGGGCATGGGAGGTATAGGAAAGACAACCCTTGCTGCTACCATATTTCAGAAGGTATCTTCCATATATGAAGGTAGTTGCTTCCTAGAAAATGTCACAGAAGAATCAAAGAGACATGGGCTCAGTTACACATACAACAGACTTTTTTCTAAGTTACTAGGGGAAGATCATGGTATTGACACTACCAAAGTAATATCATCTATTGTTATGAAAAGACTCAAACGCATGAAAGCTTTCATTGTACTAGATGATGTTCGTACTTTAGAACTTCTAGAAAATTTGATTGGAGTAGGGCACGATTGCCTTGGAGCTGGTAGCAGAGTCATTGTGACAACCAGAGATAAGCATGTGTTAACAGGAGGAGGAATTGACGAAATTCATCAAGTTAAGGAAATGAACTCTCAAAACTCCATGAGGTTGTTCAGCTTGAATGCCTTCAAAAAAATCCTTCCCAATGAAGGATATGAGCAGATATCAAACAATGTAGTTTCTTATGCAAAAGGAAACCCTTTGGCTTTGAAAGTTCTGGGTTCATTTCTTCGTACAAAAAGTAAAAGAGAATGGGATAGTGCTATAAATAAACTGAAGGAAATTCCCAATGCTGAAATTCAAAAGGTGTTGAGATTAAGCTATGATGAATTAGATGATACAGAGAAAAATATATTTCTAGACATTGCATGTTTTTTCAAAGGATGTGGAAGCAGCAGCAGTGTAACAAAAATATTAAATGCCTGTGGTTTCTTTGCAGATATTGGGATAAGAAACCTTTTTGACAAGGCTCTTGTAACTATTACTTCAAACAATCACATACAGATGCATGATTTGATACAAGAAATGGGTAGGGAAATTGTTCGTGAAGAATCTATCAAAAACCCTGGAGAACGCAGTAGATTGTGGAATGCTGGTGAAATTTGTGATGTGTTGACAAACAATAATGGGACCAGTGCAGTTGAAAGCATATGCTTATATATGGATCAAACCATCTGCATAAATTTGAGCTCTAATGCATTCACAAAGATGCCAAACCTAAGATTACTTGCTTTCGAAGGCCATAATTATGTGCATCTTCCAGGGGGGCTTGATTTTTTGCCTAACAACTTGAGAAGTTTTGGATGGAGTGCATATCCATTAAATTCTCTACCATCAAATTTTTCTCCTTGGAATCTTGTTGAACTTAGCCTTCCATATAGCAACTTGGAAAAACTTTGGAACGGAGCACAGAATTTGCCGAGTTTAGAGAGAATTGACCTTGGTAAGTCTACACGCTTAATAGAGTGTCCAAATTTTTCAAATGCCCCAAATCTTAAGCATATAAATCTTGAAAAATGTGAAAGCATGTCTCATGTTGACCCATCTATTTTCAATCTCCCAAATCTTGAAGAGTTAGATGTGAGTGGATGTAAGTCACTTAAGAGCCTCTACAACAGCACTCGTTCACAATCTTTCAAGAGACTTTTTGCATATAAATGTTACAATCTCCAAGAGTTCATATCAATGCCCCAAAACACTAATGATCCTTCCACAACCACAACTGGGTTGACATCATCAACTTTGCACATCAGAAATTTTGAAGTAGTATTTTCTGTTCACATCTCTGAGAGTCTTCTGGATCTTCCTGAAAACTTTGCAAACTATATCGTACTTTCTCACCCAAAGATGAATAAGCAACACACTTTAACCACCTTGCATAAAGTACTCCCTAGCCCTTGCTTTAGGTATGTTAGACGTTTAATTTTCAATGCGTGTCACAATTTATCTGAAATCCCAGACAGCATCTCCTTGCTATCATCATTGGAGTTTTTAAGACTATTTGCCTGTCCTGTCATAAGCTTACCTGAAAGCATTAATTGTCTTCCAAGACTCAAGTTTCTTGAAGTTGGTTACTGTGAAATGCTTCAATCTATACCTTCTCTTCCACAATCAATTCAGTGGTTCTATGTTTGGGACTGTGAATCTCTTCAGAATGTGTTGAATTCAACAAATGAACAAACCAAAAAACACCAAAATAAGTGTACTGTTCTCCTCCCTAACTGCCTAGAATTGGATCAACATTCATTTGTTTCCGTTTTGAAAGATGCCATTGTAAGGATTGAACTTGGAGCAAAACCAATACTACCCGAAGATGTATTAGAAAACAATGAAGAAGCATCTTCAGATGATGATAATGATGATGTTGATGATGTTGATGATAGATATATTTATGACAATTTAATAGAAGGTAAGATTTTCTACATGTTACCAGCTGGTAATTTTAAAATTGGAGACTGGTCCCCTTACCATTCTACACAAAATTGTGTGACTATTGATCTTCCCCGTAGTGATAATTTGGGTATCATTTTCTACTTGGTTCTTTATCAAGCTCAACCATATCGCATTGAAGATGGTGGAAGTTTTGGATGTGAATGCTACTTAGAAACCACTTCCGGTGAATGTATTAGTATAAAGAGTTTCTTTGTAGATGAAAGAGTGTTGGCTCATTCTCGTACTTCATTTAACATGATGTCGGATCATTTGTTTTTATGGTACGACACACAATGTTGCGAGCAAGTAATGGAAGCTATCAAAGAAATAAAAGCCAATGCCATGAGTGCCATTCACAATTCAAAGCTTACATTTAAATTCTTGGCTCGTACTGAAAAAAATATGGAAACAGCGATAAAAGAGTGTGGTTTTCGATGGATATATTCCTCAGAAGGTCAAGTTGTCGAGGAAGAAGGATGTGAATCTGAGACAAATAAGGAAACTCACACAGTGGACGGTTCTGAATCTGATGAGCAAGAAGAAACAGTTCCAGCAGCAATGAATTTTCAGCAAAGTGTCTATGGAACTCCCAATCTGGAAGCAGTAGAAACAAAAGACTTAAGGGGTGTGCTTGAAGAACTCTTGCATATTGGATTTGGCGGAGAACTCATGTCATAA 3558 0.3671 MASSSSSSPHKKHDVFISFRGEDTRANFTSFLHAALCKNHIETYIDYRIKKGEEVWEELEKAIKASALFLVVFSENYASSTWCLNELVEIMKCKKNDEDNVVVIPVFYRIEPSHVRKHTGSYQTALAKQKKQGKDMIQRWKNALFEVANLSGFDSSTYRTENDLIEDIIKVVSQNLNQKYTNELRCLFIPDENYSSIESLLKNDSSEVRTIGIWGMGGIGKTTLAATIFQKVSSIYEGSCFLENVTEESKRHGLSYTYNRLFSKLLGEDHGIDTTKVISSIVMKRLKRMKAFIVLDDVRTLELLENLIGVGHDCLGAGSRVIVTTRDKHVLTGGGIDEIHQVKEMNSQNSMRLFSLNAFKKILPNEGYEQISNNVVSYAKGNPLALKVLGSFLRTKSKREWDSAINKLKEIPNAEIQKVLRLSYDELDDTEKNIFLDIACFFKGCGSSSSVTKILNACGFFADIGIRNLFDKALVTITSNNHIQMHDLIQEMGREIVREESIKNPGERSRLWNAGEICDVLTNNNGTSAVESICLYMDQTICINLSSNAFTKMPNLRLLAFEGHNYVHLPGGLDFLPNNLRSFGWSAYPLNSLPSNFSPWNLVELSLPYSNLEKLWNGAQNLPSLERIDLGKSTRLIECPNFSNAPNLKHINLEKCESMSHVDPSIFNLPNLEELDVSGCKSLKSLYNSTRSQSFKRLFAYKCYNLQEFISMPQNTNDPSTTTTGLTSSTLHIRNFEVVFSVHISESLLDLPENFANYIVLSHPKMNKQHTLTTLHKVLPSPCFRYVRRLIFNACHNLSEIPDSISLLSSLEFLRLFACPVISLPESINCLPRLKFLEVGYCEMLQSIPSLPQSIQWFYVWDCESLQNVLNSTNEQTKKHQNKCTVLLPNCLELDQHSFVSVLKDAIVRIELGAKPILPEDVLENNEEASSDDDNDDVDDVDDRYIYDNLIEGKIFYMLPAGNFKIGDWSPYHSTQNCVTIDLPRSDNLGIIFYLVLYQAQPYRIEDGGSFGCECYLETTSGECISIKSFFVDERVLAHSRTSFNMMSDHLFLWYDTQCCEQVMEAIKEIKANAMSAIHNSKLTFKFLARTEKNMETAIKECGFRWIYSSEGQVVEEEGCESETNKETHTVDGSESDEQEETVPAAMNFQQSVYGTPNLEAVETKDLRGVLEELLHIGFGGELMS* 1186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1007 1185 Pfam TIR domain 12 182 IPR000157 GO:0007165
Mtr8g1007 1185 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 185 438 IPR027417 -
Mtr8g1007 1185 Pfam NB-ARC domain 197 427 IPR002182 GO:0043531
Mtr8g1007 1185 Gene3D Ribonuclease Inhibitor 725 893 IPR032675 -
Mtr8g1007 1185 Gene3D Ribonuclease Inhibitor 508 724 IPR032675 -
Mtr8g1007 1185 PRINTS Disease resistance protein signature 210 225 - -
Mtr8g1007 1185 PRINTS Disease resistance protein signature 285 299 - -
Mtr8g1007 1185 PRINTS Disease resistance protein signature 379 393 - -
Mtr8g1007 1185 PRINTS Disease resistance protein signature 667 683 - -
Mtr8g1007 1185 SUPERFAMILY Toll/Interleukin receptor TIR domain 2 153 IPR035897 -
Mtr8g1007 1185 MobiDBLite consensus disorder prediction 1119 1141 - -
Mtr8g1007 1185 MobiDBLite consensus disorder prediction 1119 1136 - -
Mtr8g1007 1185 Coils Coil 863 883 - -
Mtr8g1007 1185 Pfam Leucine Rich Repeat 601 620 IPR011713 -
Mtr8g1007 1185 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 9 731 - -
Mtr8g1007 1185 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 784 878 - -
Mtr8g1007 1185 SMART till_3 12 150 IPR000157 GO:0007165
Mtr8g1007 1185 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 784 878 IPR044974 GO:0006952
Mtr8g1007 1185 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 9 731 IPR044974 GO:0006952
Mtr8g1007 1185 Gene3D - 173 334 IPR027417 -
Mtr8g1007 1185 Gene3D - 10 172 IPR035897 -
Mtr8g1007 1185 SUPERFAMILY L domain-like 535 872 - -
Mtr8g1007 1185 Gene3D - 344 428 IPR042197 -
Mtr8g1007 1185 ProSiteProfiles TIR domain profile. 11 176 IPR000157 GO:0007165
Mtr8g1007 1185 SUPERFAMILY "Winged helix" DNA-binding domain 415 521 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1007 Mtr-Chr8 12247391 12253734 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g1007 8 837 WRKY Transcription Factor Family AT4G12020 31.958 1.26e-107 371
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g1007 - - mtr:MTR_8g433020 1857.03