Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0977 ATGGATATAGGTTTTAGCTTACCGCAGTCAAAAGTAGCTTTCAACGGTCTCGATTCTTGTTGTGCTTTTGTTTGTAATTCGAGGAACGTTTTGAAAGCTCGTTGTGGAAGAGAGTTGAGAGTTTCGACTTTGAAGTTGAATTTGTTGTGTAGGAGTAGTAAACTTTTTAGGGGAAATAGGGGAGTTTGGCTTAAGTGTCAGGGAAATGATTCTTTTGCATATGATAATGGAAATGGTAGGAATGTTGATAATTTGAAAGGTTTGAATGAAGAATCGAATTTGGGGTCGATTTCTGGTGCGGAATCAGGTGAACCTTTGGGAGAAGTTGGGGGTCAGGTGGAAGTAGATGTGCAAAGTGTGGATGAATTGAAAGAATTGTTGCAAAAGGCGTTGAAGGAATTAGAAGCTGCTAGAGTTAATAGTATTGTGTTTGAGGAAAAGGTTAAAAAGATATCAGAAACCGCAATATCTTTGCAAGATGAAGCATCAAGAGCTTGGACTGATGTTAATTCTACACTTGATATTATTCAGGAAATTGTGAGTGAAGAATTTATTGTGAAAGAAGCGGTTCAAAACGCAACAATGGCTCTTTCTTTAGCTGAGGCAAGGCTTCAAGTAGCCGTTGAATCTTTGGAAGTTGTAAATGAAGATTATAATTCCGTGCGAGGTTCTAACGAGAGTGATGGTGGCAAAGGTGTAGGGCAAGAGGATAAAGAACGTGTGGTTGCTCGGGAAGATATCAAGGATTGTCAGACAAATTTAGCGTGTTGTGAGGCTGAGTTGAGGCGATTGCAAAGTAGAAAAGAGGAGTTGCAGAATGAAGTGAATAAATTGCATGAAATTGCTGAAAAAGCTCAGTTGACTGCTGTGAAAGCGGAAGAGGATGTGAATGACATCATGCATTTAGCTGAGCAAGCTGTTGCCCTTGAACTTGAGGCTGCAAAGCGTGTTAACGATGCAGAGATTGCATTTCAGAAAGCAAACAAGTCTTTCGTTAGCGTTAATTCTGACACGACAGACACTCTACCAGTAGAAGATGTTGTGGCCCTCCCCGAGGAGGAGAAATTGGTTCAACATTTTTCTGGGGATGCTGCTGTTAAAGGAGAGCTCGATTTATCAAGTAATGATGAGTCTTTGCTTGCCGCGGAATCACTAGAGACACAGTCCAATAAAACCAGCCAAACCTTGGAAGAGACAACTGAATCTGATTATCTAAGTGATCTTGATAATGAACAGTTAAGCTTAGACTCTTCTAAAGAAGCTGAACTCGAAGTAGAGAAGTCGAAGAATGTAGTTCAAACAAAAAAACAAGAAACACAAAAAGAATCGACTAGGGATAATTCACCATCTTCTCCCAAGTCATCATTGAAGAAGTCGTCCCGATTTTTTCCTGCATCATTTTTCTCGTCTAGTACAGATGAGTTTGATTACTCACTAGCATCAGCTTTCAATGATCTTGTGGAATCTGCACAGAAGCAATTACCAAAGCTGATTGTTGGGTTATTGTTAGTTGGAGCAGGGCTCACCTTTTATGCCAATCGAGCAGATAGGAGTTCTCAACTGCTTCGGCAGCCAGAAGTCGTTGCAACCACAGTTGAAGAAGTTTCCTCAAGTGCAAGGCCTCTAGTTAGACAACTTCAGGAACTCCCCAATAGAATTAAGAAAGTTATTGCGTCGATACCTGAACAAGAGGTGAGCGACGAGGAAGCTTCCCTCTTTGACATGCTCTGGCTATTACTTGCTAGTGTTATATTTGTCCCTCTATTTCAAAAAATTCCTGGAGGCAGTCCTGTTCTTGGTTACTTGGCTGCTGGAATATTGATTGGGCCTTATGGACTCTCAATCATTCGCAATGTTCATGGGACAAAAGCAATCGCTGAATTTGGAGTTGTTTTCCTGTTATTTAATATTGGCCTGGAGCTCTCTGTGGAAAGACTTAGTTCAATGAAGAAATATGTCTTTGGAGTAGGCTCTGCTCAGGTTTTGTTGACTGCCGCAGTGATTGGGTTGGTGGCTCATTATGTTTGTGGCCAAGCTGGCCCTGCTGCTATTGTCATTGGGAATGGATTGGCATTATCATCAACTGCTGTTGTTCTGCAGGTGTTACAGGAGAGAGGTGAGAGCACATCACGACATGGACGAGCTACATTTTCTGTATTACTTTTTCAGGATTTGGCTGTCGTCGTCTTGCTAATACTCATACCTCTTATCTCACCTAATTCTTCCAAAGGAGGGGTTGGCTTTCAAGCCATTGCTGAAGCTCTTGGTCTGGCTGCCGTTAAGGCTGCAGTTTCCATCACTGCCATAATTGCAGGTGGACGATTGCTCCTTCGACCTATATACAAGCAAATTGCAGAAAATCAGAATGCAGAAATATTTTCAGCCAATACACTCTTCGTTGTTCTTGGGACCAGCCTTCTCACAGCCAGGGCAGGCCTGTCCATGGCTTTGGGAGCATTTTTGGCTGGTTTACTACTGGCAGAAACCGAATTTTCCTTACAGGTCGAATCTGATATTGCTCCATATCGTGGCCTTCTATTGGGCCTCTTCTTTATGACGGTTGGAATGTCAATTGATCCAAAACTTCTTCTTTCAAACTTTCCAGTCATCATAGGGACATTGGGACTCTTGATATGTGGCAAGACACTCTTGGTTGCTTTGATTGGCAAAATTTTCGGTATTTCAATCATATCCGCCATCAGAGTTGGGCTTCTTCTTGCTCCTGGAGGAGAATTTGCATTTGTGGCTTTTGGCGAAGCTGTTAATCAGGGTATAATGTCTTCCCAGTTGTCCTCTTTGCTGTTCCTTGTTGTGGGAATTTCAATGGCCCTTACGCCATGGCTAGGCGAAGGAGGCCAGCTGATTGCTTCCCGTTTTGAGCAACATGATGTTCGAAGCTTACTACCTGTAGAAAGTGAGACAGACGATCTGCGTGATCATATCATTATTTGTGGATTTGGGCGAGTTGGCCAGATCATTGCACAACTTCTTTCTGAGCGACTTATTCCTTTTGTCGCACTAGATGTGCGAAGTGAAAGAGTGGCAATTGGGCGTTCATTGGATCTCCCAGTGTACTTCGGCGATGCTGGTAGTCGAGAGGTTCTACACAAAGTCGGGGCTGGAAGGGCAAGTGCTGCAGCAATAACTCTAGATTCCCCTGGTGCAAACTATAGAACGGTTTGGGCTCTGAGCAAACACTTCCCAAATGTGAAGACTTTTGTTCGCGCTCATGATGTTACTCATGGATTGAATTTAGAAAAAGCTGGAGCTACAGCGGTTGTCCCAGAGACCTTGGAACCAAGTCTTCAACTAGCCGCAGCAGTGCTTTCTGAGGTTAAACTTCCTGCATCGGAGATTGCGGCAACAATTAATGAATTCAGATCCCGCCATCTGGCCGAACTTACAGAACTATCTGAAACAAGTGGAAGTTCTCTTGGTTATGGATATAGTAGAATGATGAGCAAACCCAAAACACAATCTCCCGATTCAATTGACGACTCCCAAGTCCCTGAAGGGTCAACATGA 3525 0.4306 MDIGFSLPQSKVAFNGLDSCCAFVCNSRNVLKARCGRELRVSTLKLNLLCRSSKLFRGNRGVWLKCQGNDSFAYDNGNGRNVDNLKGLNEESNLGSISGAESGEPLGEVGGQVEVDVQSVDELKELLQKALKELEAARVNSIVFEEKVKKISETAISLQDEASRAWTDVNSTLDIIQEIVSEEFIVKEAVQNATMALSLAEARLQVAVESLEVVNEDYNSVRGSNESDGGKGVGQEDKERVVAREDIKDCQTNLACCEAELRRLQSRKEELQNEVNKLHEIAEKAQLTAVKAEEDVNDIMHLAEQAVALELEAAKRVNDAEIAFQKANKSFVSVNSDTTDTLPVEDVVALPEEEKLVQHFSGDAAVKGELDLSSNDESLLAAESLETQSNKTSQTLEETTESDYLSDLDNEQLSLDSSKEAELEVEKSKNVVQTKKQETQKESTRDNSPSSPKSSLKKSSRFFPASFFSSSTDEFDYSLASAFNDLVESAQKQLPKLIVGLLLVGAGLTFYANRADRSSQLLRQPEVVATTVEEVSSSARPLVRQLQELPNRIKKVIASIPEQEVSDEEASLFDMLWLLLASVIFVPLFQKIPGGSPVLGYLAAGILIGPYGLSIIRNVHGTKAIAEFGVVFLLFNIGLELSVERLSSMKKYVFGVGSAQVLLTAAVIGLVAHYVCGQAGPAAIVIGNGLALSSTAVVLQVLQERGESTSRHGRATFSVLLFQDLAVVVLLILIPLISPNSSKGGVGFQAIAEALGLAAVKAAVSITAIIAGGRLLLRPIYKQIAENQNAEIFSANTLFVVLGTSLLTARAGLSMALGAFLAGLLLAETEFSLQVESDIAPYRGLLLGLFFMTVGMSIDPKLLLSNFPVIIGTLGLLICGKTLLVALIGKIFGISIISAIRVGLLLAPGGEFAFVAFGEAVNQGIMSSQLSSLLFLVVGISMALTPWLGEGGQLIASRFEQHDVRSLLPVESETDDLRDHIIICGFGRVGQIIAQLLSERLIPFVALDVRSERVAIGRSLDLPVYFGDAGSREVLHKVGAGRASAAAITLDSPGANYRTVWALSKHFPNVKTFVRAHDVTHGLNLEKAGATAVVPETLEPSLQLAAAVLSEVKLPASEIAATINEFRSRHLAELTELSETSGSSLGYGYSRMMSKPKTQSPDSIDDSQVPEGST* 1175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0977 1174 ProSiteProfiles RCK N-terminal domain profile. 980 1102 IPR003148 GO:0006813
Mtr8g0977 1174 Coils Coil 247 295 - -
Mtr8g0977 1174 PANTHER K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC 42 1173 - -
Mtr8g0977 1174 Gene3D - 568 953 IPR038770 -
Mtr8g0977 1174 PANTHER K(+) EFFLUX ANTIPORTER 1, CHLOROPLASTIC-RELATED 42 1173 - -
Mtr8g0977 1174 Coils Coil 382 402 - -
Mtr8g0977 1174 Coils Coil 418 438 - -
Mtr8g0977 1174 MobiDBLite consensus disorder prediction 417 443 - -
Mtr8g0977 1174 Gene3D - 977 1140 - -
Mtr8g0977 1174 MobiDBLite consensus disorder prediction 1141 1174 - -
Mtr8g0977 1174 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 977 1118 IPR036291 -
Mtr8g0977 1174 MobiDBLite consensus disorder prediction 417 458 - -
Mtr8g0977 1174 Coils Coil 117 140 - -
Mtr8g0977 1174 Pfam Sodium/hydrogen exchanger family 578 948 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Mtr8g0977 1174 Pfam TrkA-N domain 981 1094 IPR003148 GO:0006813
Mtr8g0977 1174 TIGRFAM 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 579 859 IPR004771 GO:0006812|GO:0008324|GO:0016021
Mtr8g0977 1174 MobiDBLite consensus disorder prediction 444 458 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0977 Mtr-Chr8 11915430 11925067 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g0977 61 1173 Inorganic Solute Cotransporters AT4G00630 69.831 0.0 1412
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0977 - - gmx:100791174 1652.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g0977 8 11915430 11925067 Mtr8g0977 8 11915430 11925067 ECH
Mtr7g1953 7 35607903 35625126 Mtr8g0977 8 11915430 11925067 PCT