Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0929 ATGGCTTTGTTGAGTTCTATGAACTCAAGGAGAGAACCTGTAAAAGAGGTTAATCCAAGTGGGGTTAAGAATACAATTTATGTGGCGGTGGCTAAAGATGTGAAAGATAGCAAATTAAATGTGATATGGGCTATACAAAATTCTGGAGGAAAGAGCATTTGCATTCTTCATGTGCACGTACCAGCAGCTAAGATCCCTATGATGGGTGCTAAATTTCCAGCAAGTGCACTGACAGAGCAAGAAGTTAAGGCATACAGGGAAATTGAAAGTCAAAACATGCAGAAGACTGTTGATGTTTATCTAGCTATCTGTCAAAGGATGGGGGTGACAGCAACTAAATTGCACATTGAAATGGATTGCATTGAAAAAGGGATTATAGAACTCATCTCTAGATATAACATACAAAATCTTGTTATGGGAGCAGCTTCTGATAAGTACCATTCTAGGAGAATGACAGATCTTAGATCTAAGAAAGCCATCTATGTATGTGAACAATCTCCAGCTTCTTGTCATATACAGTTTATCTGCAAAGGATATCTTATACAGACAAGGGATTGCAGTTTGGAAAACTTTAGAGTAGAGGCCACATCTCCTTTGGTGCAGCAAATGCAAAACTCTGAAGTTGGTCACTCACCTCACTTGATATCTAGATCAATTTCACATGATCAAGAGTTACATCATCATAGAGTAAGATCTATCAGCTCTGCATCCGAAAGTGGAAGGAGCATGGCATCATCTGTTTCTTCTTCAGAACGATTTTCATCGTTTGAAACGGTATTGACCCCAAATTTGACTAGTGATGGCAATGAGAGTTTGTTGGACTTGAAAATGAGTTACCTGTCTAGTATTAAAGAGGAGAATCTTTGTCATTCATCACCTCCTGGTGTGCTGGATAGAGGAATGGACGAGAGTGTCTATGATCAACTTGAACAGGCTATTGCGGAGGCTGTGAAGGCTAGGTGGGATGCATATCAAGAAACTGTTAAGCGTCGCAAAGCTGAAAAAGATGTCATTGATACTATACGCAAGACTAAAGACACCATAATCTTGTATGAAGAAGAGGTAAAACTAAGGAAAGAGTTAGAGGAAGCGCTACAGAAAGCGAAAGAAGAAATTGACAACATGAAAAGCAAATTAGACAAAGTCAACAAGGAACTCCAACTTGCCTTGAATCACAAGTCATCAAAGGAGAATCAGATTAGTGAAGCATCAAGAACACACTCTCTTCAACTTTTGTCAGAGTTTTCTTTTTCAGAGATTGAAGAAGCAACATGTAACTTCAATCAATCGTTAAAGATTGGTGAAGGTGGATACGGAAAGATATTTAAAGGTATCCTTCGTCACACTGACGTGGCGATAAAAGTGCTGAGCCCCAACAGTACTCAAGGACCCTCAGAATTTCAACAGGAGGTTGAAGTATTGAGCAAGTTAAAGCATCCAAATCTTATCACACTTATAGGAGTAAACCAAGAATCAAAAACTCTTATCTACGAGTATTTACCAAATGGAAGCCTTGAAGATCATCTCAGCCGCAATGGAAATAATAATGCACCTCCATTAACATGGCAGACTCGAATTCGCATCGCCACAGAACTATGTTCTGCTCTCATATTTCTCCATTCCAATAAACCTCACAGCATAGTCCATGGTGACTTAAAACCTTCCAACATTCTCCTTGATGCAAACCTTGTAACCAAGCTTAGTGACTTCGGAATCTGTCGTGTATTATCGTGTCAAAACGATTCTTCTAGTAACAATAGTACTACACAGTTTTGGATCACTAGTTTTGCAAAGGGAACTTTTGCATACATGGATCCGGAATTCTTGGGTACAGGCGAACTTACTTCAAAGTCAGATGTTTATTCATTTGGAATTGTTTTGTTGAGATTGATAACTGGAAAACCAGCTTTAGGAATAAAGAATGAAGTGTTATATGCATTAAATAATGCTGGTGGAAATGTGAAATCAGTTTTGGATCCTTTGGCTGGAGATTGGCCTATTGTGGAAGCTGAAAAGCTGGTTCATTTTGCTTTGAGGTGTTGTGATATGAACAAAAAGAGTAGGCCAGAGCTTTGTTCAGAAGGTTGGAGGGTGTTGGAACCTATGAAGGTTTCTTGTAGTGGCACAAACAACTTTGGACTTAAGTCCTGTTTGGATAAACAGCTTAATAGGACAACTTGA 2181 0.3902 MALLSSMNSRREPVKEVNPSGVKNTIYVAVAKDVKDSKLNVIWAIQNSGGKSICILHVHVPAAKIPMMGAKFPASALTEQEVKAYREIESQNMQKTVDVYLAICQRMGVTATKLHIEMDCIEKGIIELISRYNIQNLVMGAASDKYHSRRMTDLRSKKAIYVCEQSPASCHIQFICKGYLIQTRDCSLENFRVEATSPLVQQMQNSEVGHSPHLISRSISHDQELHHHRVRSISSASESGRSMASSVSSSERFSSFETVLTPNLTSDGNESLLDLKMSYLSSIKEENLCHSSPPGVLDRGMDESVYDQLEQAIAEAVKARWDAYQETVKRRKAEKDVIDTIRKTKDTIILYEEEVKLRKELEEALQKAKEEIDNMKSKLDKVNKELQLALNHKSSKENQISEASRTHSLQLLSEFSFSEIEEATCNFNQSLKIGEGGYGKIFKGILRHTDVAIKVLSPNSTQGPSEFQQEVEVLSKLKHPNLITLIGVNQESKTLIYEYLPNGSLEDHLSRNGNNNAPPLTWQTRIRIATELCSALIFLHSNKPHSIVHGDLKPSNILLDANLVTKLSDFGICRVLSCQNDSSSNNSTTQFWITSFAKGTFAYMDPEFLGTGELTSKSDVYSFGIVLLRLITGKPALGIKNEVLYALNNAGGNVKSVLDPLAGDWPIVEAEKLVHFALRCCDMNKKSRPELCSEGWRVLEPMKVSCSGTNNFGLKSCLDKQLNRTT* 727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0929 726 CDD STK_N 25 178 - -
Mtr8g0929 726 ProSitePatterns Protein kinases ATP-binding region signature. 433 454 IPR017441 GO:0005524
Mtr8g0929 726 Coils Coil 351 399 - -
Mtr8g0929 726 ProSiteProfiles Protein kinase domain profile. 427 703 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g0929 726 SUPERFAMILY Protein kinase-like (PK-like) 408 690 IPR011009 -
Mtr8g0929 726 SMART serkin_6 427 702 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g0929 726 Gene3D Transferase(Phosphotransferase) domain 1 500 704 - -
Mtr8g0929 726 Pfam Protein kinase domain 428 690 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g0929 726 PANTHER U-BOX KINASE FAMILY PROTEIN 395 714 - -
Mtr8g0929 726 PANTHER U-BOX KINASE FAMILY PROTEIN 6 386 - -
Mtr8g0929 726 Gene3D Phosphorylase Kinase; domain 1 396 499 - -
Mtr8g0929 726 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 42 143 - -
Mtr8g0929 726 ProSitePatterns Serine/Threonine protein kinases active-site signature. 547 559 IPR008271 GO:0004672|GO:0006468
Mtr8g0929 726 PANTHER OS02G0152300 PROTEIN 395 714 - -
Mtr8g0929 726 PANTHER OS02G0152300 PROTEIN 6 386 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0929 Mtr-Chr8 11428654 11437022 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g0929 12 714 U-box Gene Family AT2G45910 45.992 0.0 639
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Mtr8g0929 Pkinase 1.3e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0929 - - mtr:MTR_8g030690 1223.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g0929 8 11428654 11437022 Mtr8g0929 8 11428654 11437022 ECH
Mtr8g0929 8 11428654 11437022 Mtr7g1998 7 36079736 36085941 ECH
Mtr7g1998 7 36079736 36085941 Mtr8g0929 8 11428654 11437022 PCT