Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0918 ATGGGAGGTTGCTGTTGTTCTGCCAGAAAAACTCATCTGCATGGAACTCCAGTGTATTACTATTGCCCACCAATTTTAGAAGAGCACGATCCTTTGGCTTCTAATGATGCTGCAAACGATTCTCTCACTGCTGGATTACTGGTAGGCTTGAACGTGGAAGAATCCACACCTGATACTTATCAGCCTCCTCCTGCACCTCTGCCTTATGATGTGGTCTTGGGAGTTCCAGTGTCAACAGACTCTGAGTCAGGCAAAGACACAGTTAGTGGTAGTAGTTTTGAAACTTTAGTTACATGTGAAGATATTGAAGAATCTGACCTTAAAGCTCAAGCTAAATCTGCACCAATATCTCCAACCAAGGCAGAACTGTGGAAATCAAATGAACTTCATGCATTGGTGATAGAAGAAGAGGACGGCTGTCCAATTTGCCTTGAAGAATATGATGTTGAGAATCCTAAAACTCTTTCAAAATGTGAACACCACTTTCACCTGGCTTGCATTCTTGAGTGGATGGAAAGAAGTGACTCTTGTCCTATATGTGATCAGGAGATGATATTTGTTCAAGAACTGGACTAG 576 0.4219 MGGCCCSARKTHLHGTPVYYYCPPILEEHDPLASNDAANDSLTAGLLVGLNVEESTPDTYQPPPAPLPYDVVLGVPVSTDSESGKDTVSGSSFETLVTCEDIEESDLKAQAKSAPISPTKAELWKSNELHALVIEEEDGCPICLEEYDVENPKTLSKCEHHFHLACILEWMERSDSCPICDQEMIFVQELD* 192
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0918 191 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 119 188 IPR013083 -
Mtr8g0918 191 ProSiteProfiles Zinc finger RING-type profile. 140 181 IPR001841 -
Mtr8g0918 191 Pfam Ring finger domain 140 180 IPR001841 -
Mtr8g0918 191 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RHB1A-RELATED 1 190 - -
Mtr8g0918 191 SMART ring_2 140 180 IPR001841 -
Mtr8g0918 191 SUPERFAMILY RING/U-box 130 187 - -
Mtr8g0918 191 PANTHER ZINC FINGER, RING/FYVE/PHD-TYPE 1 190 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Mtr8g0918 Mtr-Chr8 11254124 11260184 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g0918 1 191 C3H Transcription Factor Family AT4G00335 58.115 1.85e-76 226
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0918 - - cam:101501651 337.035
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g2016 7 36280162 36283490 Mtr8g0918 8 11254124 11260184 PCT