Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0916 ATGACTACAACGTTTGTTCATAACCGGAGCCAACACTCCGGTCACCGGAGCACGCCGGACAGAATGTCTCGTTCTTCCGACTTCAGCACCTCGGTTCAGTCAACAACCTCCTCTTCTTCTTCCGGTAGCCGGAATCCAGTTGTTGCCGCCGCCATGTCGGTTGCTGGATTGTTTGCCGCTTGTTTCACGCCGCCGGATAGTAGCAATTCTAAGAGCGTTGTTGATTCTGAGGAATTCAAATCTACTTCTACTTCTGTTGCATCAAATGCTTCAAGAGCTGGTAGTCAGAGAGGGCGTGGCTCAAACCGAGGTACCAACATTGGTTTATACAACACAATCCAGGGGAATGAGTCTGGCATTGTCAAGTACACCATGGAGGAAATCATCCAAGCCACAAGAAACTTCTCTCCTTCTTTCAAGATTGGTCAAGGTGGTTTTGGGGCTGTCTACAAGACCAAACTCTTGGATGGAACCATTGTTGCAGTAAAGCGTGCTAAGAAGAGTGTACATGAGAAAAATTTAGGTTCTGAGTTCCAGAGCGAGGTCCAAACACTATCAAGGGTTGAACATTTGAACTTGGTAAAGTTCTATGGATATTTGGAGCAAGGGGATGAAAGAATCGTTGTTGTGGAGTATGTTCCTAATGGAACCCTCCGAGAGCATTTAGATTGCATTCATGGAAACGTTCTGGACCTTGCTGCTCGTCTAGACATTGCAATTGATGTATCGCATGCTCTCACCTATCTTCATATGTATATGGATCATCCTATCATTCACAGAGACATAAAATCTTCCAACATTCTCCTCACCGAGCATTTTCGAGCTAAGGTTGCAGACTTTGGTTTTGCTAGACAGGCACCTGACAGTGACTCTGGCATGACACATGTCTCTACCCAAGTTAAGGGAACAGCTGGCTACTTGGATCCGGAATACTTGAAAACTTATCAACTAACCGAAAAGAGTGACGTTTATTCGTTCGGTGTTTTGCTTGTTGAACTTGTCACGGGAAGACGGCCCATTGAACCAAAATTCGAACTCAAAGAGAGAATAACAGTAAAATGGGCTATGAAGAGGTTTATTGATGGAAACGCGATCTCGGTCTTGGACACAAGACTGGATCAAACTTCAGCAAATAATTTGGCCTTAGAAAAGATACTTGAACTAGCTTTACAGTGCTTGGCTCCACATAGACAAAATAGGCCTAACATGAAGAGATGTGCTGAGATCCTTTGGGCTATTCGCAAGGATTACAGAGAGATATCGGCTTCAAACTTTCGATCATATTCGACTACTTCCCAAAGGAGTGCCTCATTGAGAGAGTGA 1323 0.4452 MTTTFVHNRSQHSGHRSTPDRMSRSSDFSTSVQSTTSSSSSGSRNPVVAAAMSVAGLFAACFTPPDSSNSKSVVDSEEFKSTSTSVASNASRAGSQRGRGSNRGTNIGLYNTIQGNESGIVKYTMEEIIQATRNFSPSFKIGQGGFGAVYKTKLLDGTIVAVKRAKKSVHEKNLGSEFQSEVQTLSRVEHLNLVKFYGYLEQGDERIVVVEYVPNGTLREHLDCIHGNVLDLAARLDIAIDVSHALTYLHMYMDHPIIHRDIKSSNILLTEHFRAKVADFGFARQAPDSDSGMTHVSTQVKGTAGYLDPEYLKTYQLTEKSDVYSFGVLLVELVTGRRPIEPKFELKERITVKWAMKRFIDGNAISVLDTRLDQTSANNLALEKILELALQCLAPHRQNRPNMKRCAEILWAIRKDYREISASNFRSYSTTSQRSASLRE* 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0916 440 Gene3D Transferase(Phosphotransferase) domain 1 213 435 - -
Mtr8g0916 440 ProSitePatterns Protein kinases ATP-binding region signature. 141 167 IPR017441 GO:0005524
Mtr8g0916 440 CDD STKc_IRAK 141 410 - -
Mtr8g0916 440 MobiDBLite consensus disorder prediction 1 45 - -
Mtr8g0916 440 MobiDBLite consensus disorder prediction 68 105 - -
Mtr8g0916 440 Pfam Protein kinase domain 140 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g0916 440 PANTHER CALMODULIN-BINDING RECEPTOR-LIKE CYTOPLASMIC KINASE 2 7 429 - -
Mtr8g0916 440 Gene3D Phosphorylase Kinase; domain 1 101 212 - -
Mtr8g0916 440 SMART serkin_6 135 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g0916 440 MobiDBLite consensus disorder prediction 23 45 - -
Mtr8g0916 440 SUPERFAMILY Protein kinase-like (PK-like) 118 413 IPR011009 -
Mtr8g0916 440 ProSiteProfiles Protein kinase domain profile. 135 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g0916 440 ProSitePatterns Serine/Threonine protein kinases active-site signature. 257 269 IPR008271 GO:0004672|GO:0006468
Mtr8g0916 440 PANTHER RECEPTOR-LIKE PROTEIN 55 7 429 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0916 Mtr-Chr8 11243564 11247360 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g0916 122 413 Receptor kinase-like Gene Family AT1G30570 44.178 4.85e-70 235
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IV Mtr8g0916 Pkinase 3.8e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0916 - - cam:101500599 734.947