Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0909 ATGGGTTTTCCGGTAGGCTACGCCGAAGTATTCTTCCCAAACCTATTCCTCCACACTTTAACCCTCCTCGGCCTCCTCCGAAGCTTCGTCTTCCTCCTCTTCCACTTCCTCGGCCTCTCCGATTTCCTCGAAACCAATACTCACCACACCGGAGAAGAAGCTACATCCACGCCGGAACCATGCAAAAACCCCTCCGTATCGGCACTTCTGATTCGGGAATTTTTACCGGCGACAAAATACGGTGAACTCACCGACACAGAAGAAGGTTGTTGCTGTGCTGTTTGTTTGTTTGAATTCTCCGAGGAAGAAGAGATACGATGTTTGAAGAACTGTCGACATATTTTTCATCGAAACTGTGTGGACCGTTGGATTGATCTTGATCAGAAAACATGTCCACTTTGTAGAACAGGTTTTGTTCCTGATGATATGGTTGATGATTATAATCAACGTCTTTGGGTTGCTTCTGGTATTAGTGAGTTTTATAGTTATGCAGATTATACTTCTTCTTTCTAA 513 0.4444 MGFPVGYAEVFFPNLFLHTLTLLGLLRSFVFLLFHFLGLSDFLETNTHHTGEEATSTPEPCKNPSVSALLIREFLPATKYGELTDTEEGCCCAVCLFEFSEEEEIRCLKNCRHIFHRNCVDRWIDLDQKTCPLCRTGFVPDDMVDDYNQRLWVASGISEFYSYADYTSSF* 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0909 170 Pfam Ring finger domain 92 135 IPR001841 -
Mtr8g0909 170 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 71 141 IPR013083 -
Mtr8g0909 170 PANTHER BRH1 RING FINGER PROTEIN 1 162 - -
Mtr8g0909 170 SMART ring_2 92 134 IPR001841 -
Mtr8g0909 170 PANTHER RING ZINC FINGER PROTEIN-RELATED 1 162 - -
Mtr8g0909 170 SUPERFAMILY RING/U-box 85 142 - -
Mtr8g0909 170 ProSiteProfiles Zinc finger RING-type profile. 92 135 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0909 Mtr-Chr8 11185191 11185928 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g0909 1 156 C3H Transcription Factor Family AT1G63840 45.625 2.00e-47 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0909 K16281 - gmx:100790975 234.187
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g2019 7 36311948 36312892 Mtr8g0909 8 11185191 11185928 PCT