Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0908 ATGGCATATACCACTATAGATGAAGCCTCTTCATCTTCTTCTCCTTCCATCCAAACATCAAGATGGACCAACCATGTTTTCTTGAGTTTTAGAGGTGAGGACACTCGCCAAGGTTTCACTGACCATCTTTTTGCTTCATTGGAAAGAAGAGGGATCAAAACATTCAAGGATGATCATGATCTTGAGAGGGGTGAAGTGATATCATATGAACTCAATAAAGCCATTGAAGAGTCTATGTTTGCTATCATCATTCTCTCACCAAACTATGCTTCCTCAACATGGTGTTTGGATGAGCTAAAAAAGATTGTTGAGTGCAGTAAGAGTTTTGGTCAAGCTGTTTTTCCAATCTTCTATGGTGTTGATCCATCTGATGTCAGGCATCAGAGAGGAAGCTTTGATGAAGCTTTTAGAAAACATGAAGAAAAGTTCCGGAAAGATAGAACGAAAGTGGAAAGATGGAGAGATGCTTTAAGAGAAGTTGCTGGTTACTCTGGTTGGGACTCCAAGGGCCGGCATGAGGCATCATTGGTGGAAACAATAGTTGAACATATTCAGAAAAAATTGATTCCTAAATTGAAGGTTTGCACAGATAACCTTGTTGGAATTGACTCGCGGATAAAGGAAGTATATTCGCTACTAGCAATGGACTTAAACAACGTTCGCTTCATAGGCATATGGGGCATGGGTGGCATTGGAAAGACAACTATTGCTAGATTAGTCTATGAAGCGATCAAAAACGAGTTCAAGGTTAGTTGCTTTCTTGCAAACATTAGAGAAACAGTTTCTAAGACAGATAACTTAGCTCATATCCAAATGGAACTTCTTTCTCATCTTAATATAAGAAGCAATGATTTTTACAATGTTCATGATGGCAAAAAGATATTAGCAAATTCTTTCAACAATAAAAAGGTTCTTCTTGTTCTTGATGATGTGAGCGAATTAAGCCAATTGGAGAATTTAGCTGGGAAGCAAGAATGGTTTGGTCCAGGAAGTAGAGTTATAATCACAAGTAGAGATAAGCACTTGTTAATGACACATGGAGTGCATGAAACTTATAAGGCTAAAGGCTTAGTAAAAAATGAAGCACTTAAGCTCTTCTGTTTGAAAGCCTTTAAAGAAATTCAACCTAAAGAAGAGTATTTGAGCTTGTGCAAAGAAGTGGTTGAATATACAAGAGGTCTTCCATTAGCACTTGAGGTATTAGGTTCACATCTTCATGGAAGAACTGTTGAGGTTTGGCATAGTGCTTTAGAACAAATAAGAAGTGGTCCTCACTACAAAATCCATGATACATTGAAAATAAGCTATGATAGTTTACAATCTATGGAGAAAAATTTGTTTCTAGATATTGCATGTTTCTTCAAAGGAATGGACATAGATGAAGTAATAGAAATTTTAGAAGGTTGTGGTTATCATCCCAAAATTGGAATTGACATTTTGATTGAAAGATCTTTGGCAACTTTGGATAGGGGGGACAATAAGTTGTGGATGCATGATTTGCTTCAAGAAATGGGAAGGAATATTGTGTTTGAAGAATCTCCAAATGATCCTGGAAAACGCAGTAGGTTATGGTCTCAAAAAGACGTTGATCAAGTATTGAGACAAAATAAGGGAACTGATAAAATTCAAGGCATAGCTATGGACTTAGTTCAACCATATGAAGCAAGCTGGAAGATTGAAGCCTTCTCGAAAATAAGTCAGCTAAGGTTACTCAAATTATGTGAAATAAAACTTCCCCTTGGCTTAAACCGTTTCCCTAGTTCACTAAGAGTTCTTGATTGGAGTGGTTGTCCTTTGAGAACCCTGCCACTCACTAATCATTTGGTTGAAATTGTTGCCATCAAATTGTATCGTAGCAAAATAGAACAACTTTGGCATGGAACACAGTTTCTTGAAAATCTGAAGTCCATCAACTTGAGCTTTTCGAAGTCTCTAAAGAGATCGCCCGACTTTGTTGGTGTACCAAATCTTGAATTCCTGGTTCTTGAAGGTTGTACAAGCTTAACTGAGATTCATCCTTCCCTTTTAAGCCACAAGAAACTTGCTCTACTGAATTTGAAAGACTGCAAAAGACTAAAAACACTTCCATGTAAAATAGAGATGAGTTCTTTGAAGGGTTTAAGTCTTTCTGGTTGCTGTGAATTTAAACATCTTCCAGAGTTTGACGAAACTATGGAAAATCTATCAAAGCTTTCTTTAGAGGAGACTGCTATAAAAAAACTTCCATCTTCGCTTGGATTTCTTGTATCCCTTCTTAGCCTGGATTTAGAAAATTGCAAGAACCTTGTTTGTCTTCCAAATACAGTAAGTGAATTGAAGTCCCTCTTAATTCTGAATGTTTCTGGCTGCTCAAAGCTCCATAGTTTTCCAGAAGGTTTAAAGGAAATGAAGTCTTTGGAGGAACTTTTTGCAAATGAAACTTCTATTGAAGAACTACCTTCATCGGTTTTTTTCCTAGAAAACCTCAAAGTAATATCATTTGCTGGTTGCAAAGGACCGGTTACTAAGTCGGTGAATACATTTTTGCTACCATTTACACAATTTCTAGGTACTCCACAAGAACCTAATGGATTTAGATTGCCGCCAAAATTATGTCTGCCTTCATTGAGGAATTTAAATTTAAGTTACTGCAATCTATCTGAAGAATCAATGCCAAAAGATTTTTCCAACTTATCTTCCTTGGTTGTTTTAAATCTCTCTGGAAACAATTTTGTTAGGCCACCAAGTAGCATTTCGAAACTTCCAAAGCTTGAATATCTTAGGCTAAACTGTTGTGAAATGCTTCAGAAGTTTCCAGAATTCCCATCAAGTATGAGGTTATTAGATGCAAGTAATTGTGCTTCATTGGAAACTTCCAAATTCAATCTATCTAGACCATGCAGTCTCTTTGCATCGCAGATACAACGACACTCGCATTTGCCCAGATTACTGAAGAGCTATGTTGAGGCACAAGAACATGGTCTACCTAAAGCAAGATTTGACATGCTTATCACAGGGAGCGAAATTCCCTCATGGTTTACACCTTCAAAATATGTTTCTGTTACAAATATGTCAGTCCCTCATAATTGTCCTCCAACTGAATGGATGGGATTTGCTTTGTGTTTCATGCTGGTGAGTTTTGCTGAACCACCTGAGTTGTGTCATCATGAAGTAAGTTGTTACTTGTTTGGACCAAAGGGTAAATTGTTTATCAGATCCAGGGATTTACCTCCTATGGAACCGTATGTCCGTCACCTCTATATTCTCTATCTGACCATCGATGAATGTCGGGAAAGATTTGATGAAGGTGGTGACTGCAGTGAAATTGAGTTTGTCTTGAAAACTTATTGTTGTGATGAATTACAAGTAGTGAGGTGTGGTTGTCGTTTGGTATTTAAGCAAGATGTTGAAGATATCTACCGAAATTATTACTAG 3414 0.3726 MAYTTIDEASSSSSPSIQTSRWTNHVFLSFRGEDTRQGFTDHLFASLERRGIKTFKDDHDLERGEVISYELNKAIEESMFAIIILSPNYASSTWCLDELKKIVECSKSFGQAVFPIFYGVDPSDVRHQRGSFDEAFRKHEEKFRKDRTKVERWRDALREVAGYSGWDSKGRHEASLVETIVEHIQKKLIPKLKVCTDNLVGIDSRIKEVYSLLAMDLNNVRFIGIWGMGGIGKTTIARLVYEAIKNEFKVSCFLANIRETVSKTDNLAHIQMELLSHLNIRSNDFYNVHDGKKILANSFNNKKVLLVLDDVSELSQLENLAGKQEWFGPGSRVIITSRDKHLLMTHGVHETYKAKGLVKNEALKLFCLKAFKEIQPKEEYLSLCKEVVEYTRGLPLALEVLGSHLHGRTVEVWHSALEQIRSGPHYKIHDTLKISYDSLQSMEKNLFLDIACFFKGMDIDEVIEILEGCGYHPKIGIDILIERSLATLDRGDNKLWMHDLLQEMGRNIVFEESPNDPGKRSRLWSQKDVDQVLRQNKGTDKIQGIAMDLVQPYEASWKIEAFSKISQLRLLKLCEIKLPLGLNRFPSSLRVLDWSGCPLRTLPLTNHLVEIVAIKLYRSKIEQLWHGTQFLENLKSINLSFSKSLKRSPDFVGVPNLEFLVLEGCTSLTEIHPSLLSHKKLALLNLKDCKRLKTLPCKIEMSSLKGLSLSGCCEFKHLPEFDETMENLSKLSLEETAIKKLPSSLGFLVSLLSLDLENCKNLVCLPNTVSELKSLLILNVSGCSKLHSFPEGLKEMKSLEELFANETSIEELPSSVFFLENLKVISFAGCKGPVTKSVNTFLLPFTQFLGTPQEPNGFRLPPKLCLPSLRNLNLSYCNLSEESMPKDFSNLSSLVVLNLSGNNFVRPPSSISKLPKLEYLRLNCCEMLQKFPEFPSSMRLLDASNCASLETSKFNLSRPCSLFASQIQRHSHLPRLLKSYVEAQEHGLPKARFDMLITGSEIPSWFTPSKYVSVTNMSVPHNCPPTEWMGFALCFMLVSFAEPPELCHHEVSCYLFGPKGKLFIRSRDLPPMEPYVRHLYILYLTIDECRERFDEGGDCSEIEFVLKTYCCDELQVVRCGCRLVFKQDVEDIYRNYY* 1138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0908 1137 Pfam C-JID domain 998 1130 IPR045344 -
Mtr8g0908 1137 SUPERFAMILY "Winged helix" DNA-binding domain 427 533 IPR036390 -
Mtr8g0908 1137 ProSiteProfiles TIR domain profile. 22 188 IPR000157 GO:0007165
Mtr8g0908 1137 SUPERFAMILY RNI-like 866 959 - -
Mtr8g0908 1137 SUPERFAMILY L domain-like 511 831 - -
Mtr8g0908 1137 Gene3D Ribonuclease Inhibitor 723 840 IPR032675 -
Mtr8g0908 1137 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 771 1083 - -
Mtr8g0908 1137 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 21 767 - -
Mtr8g0908 1137 PRINTS Disease resistance protein signature 222 237 - -
Mtr8g0908 1137 PRINTS Disease resistance protein signature 298 312 - -
Mtr8g0908 1137 PRINTS Disease resistance protein signature 391 405 - -
Mtr8g0908 1137 PRINTS Disease resistance protein signature 770 786 - -
Mtr8g0908 1137 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 771 1083 IPR044974 GO:0006952
Mtr8g0908 1137 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 21 767 IPR044974 GO:0006952
Mtr8g0908 1137 Pfam NB-ARC domain 208 441 IPR002182 GO:0043531
Mtr8g0908 1137 SMART till_3 23 163 IPR000157 GO:0007165
Mtr8g0908 1137 Gene3D Ribonuclease Inhibitor 556 722 IPR032675 -
Mtr8g0908 1137 Gene3D Ribonuclease Inhibitor 853 986 IPR032675 -
Mtr8g0908 1137 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 187 450 IPR027417 -
Mtr8g0908 1137 Gene3D - 188 351 IPR027417 -
Mtr8g0908 1137 Pfam TIR domain 25 200 IPR000157 GO:0007165
Mtr8g0908 1137 Gene3D - 356 446 IPR042197 -
Mtr8g0908 1137 SMART LRR_typ_2 866 890 IPR003591 -
Mtr8g0908 1137 SMART LRR_typ_2 796 819 IPR003591 -
Mtr8g0908 1137 SMART LRR_typ_2 725 748 IPR003591 -
Mtr8g0908 1137 SMART LRR_typ_2 891 914 IPR003591 -
Mtr8g0908 1137 SMART LRR_typ_2 654 678 IPR003591 -
Mtr8g0908 1137 Gene3D - 17 187 IPR035897 -
Mtr8g0908 1137 SUPERFAMILY Toll/Interleukin receptor TIR domain 13 166 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0908 Mtr-Chr8 11172227 11177390 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g0908 15 854 WRKY Transcription Factor Family AT4G12020 31.766 7.82e-114 388