Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0899 ATGTCAGTATACGATGCAGCATTCATCGACACACAACTATCCAAAAAAACATCAATCTTCGGTCTCCGTCTCTGGGTTGTCATCGGAATCCTCGTCGGTTCTCTTATCGTCTTAACTCTCTTCCTTCTCTCTCTATGTCTCACCTCCCACCGCCGCCGCAAAAACCACCATAAACCAACCAAGCTCACCCACTTCACTCCCGTAGTCTCCAAGGAAATCCAAGAGATCATCCACGCGCCACCGTTACCAGAGATCCACGTCGACACAGTGAAGCTTGAGCTCCGACGTGTTTCCACCAGTGGAGAGAGTAAGGGAGGTGGTAGTGTGTGTGAAACTGCGTCTTCTATTGGAAGTGTTGGACCGGAAGTTTCGCATCTTGGGTGGGGGAGATGGTATACGCTAAGAGAACTTGAAGCTGCTACTAATGGTTTGTGTGAAGATAATGTTATTGGTGAAGGTGGTTATGGAATTGTTTATAGTGGTGTTCTTGTTGATGGTACCAAGATTGCTGTTAAGAATCTTTTGAATAACAAAGGCCAAGCTGAGAGAGAATTTAAAGTTGAGGTAGAAGTAATTGGTCGTGTTCGGCACAAGAATCTTGTTAGGTTGCTCGGATATTGTGTTGAAGGCGCATACAGGATGCTTGTGTATGAGTTTGTTGATAATGGCAATCTAGACCAGTGGCTGCATGGAGATGTTGGACCTGTAAGCCCTATGACATGGGATATCCGGATGAACATTTTATTGGGCACAGCAAAAGGATTGGCTTATCTTCATGAGGGTCTTGAACCAAAAGTCGTCCACCGAGATGTGAAATCAAGCAACATACTCATTGATCGTCAATGGAACTCTAAGGTTTCTGATTTCGGTCTTGCTAAGCTTCTGCATTCTGACCACAGCTATGTCACGACTCGAGTGATGGGGACATTTGGTTATGTTGCACCCGAGTATGCCTGCACTGGAATGCTGACCGAGAGGAGTGACGTATATAGCTTTGGGATACTTATCATGGAACTAATCACCGGAAGAAGTCCTGTCGATTATAGCAGACCGCAGGGAGAGGTAAATTTAGTTGAGTGGTTAAAAAATATGGTTGGGAGTCGAAGAGCCGAGGAAGTAGTTGATCCTAAGATTTCAGAGAAGCCGTCTTCAAAGGCTCTTAAACGTTCCCTATTGGTTGCTCTTCGATGTGTTGATCCCGATTCCTTAAAGAGGCCTAAAATGGGACATGTGATCCACATGCTTGAGGCTGACGACCTCTTATTTCGCGAGGATCGAAGGATCGTCGGAGAATCTTCTCATTCCAATCGCGATTATCAACGAGAGCATAAGGGTTCGAGTTTAGGTAAAAATCGGATAGGTGGAGAGATCACTGATCAAAGTGAAGATGATAGTAGTAGTAGAAGTCACCATCAGCCAACTAAGTTGAGATGA 1434 0.4512 MSVYDAAFIDTQLSKKTSIFGLRLWVVIGILVGSLIVLTLFLLSLCLTSHRRRKNHHKPTKLTHFTPVVSKEIQEIIHAPPLPEIHVDTVKLELRRVSTSGESKGGGSVCETASSIGSVGPEVSHLGWGRWYTLRELEAATNGLCEDNVIGEGGYGIVYSGVLVDGTKIAVKNLLNNKGQAEREFKVEVEVIGRVRHKNLVRLLGYCVEGAYRMLVYEFVDNGNLDQWLHGDVGPVSPMTWDIRMNILLGTAKGLAYLHEGLEPKVVHRDVKSSNILIDRQWNSKVSDFGLAKLLHSDHSYVTTRVMGTFGYVAPEYACTGMLTERSDVYSFGILIMELITGRSPVDYSRPQGEVNLVEWLKNMVGSRRAEEVVDPKISEKPSSKALKRSLLVALRCVDPDSLKRPKMGHVIHMLEADDLLFREDRRIVGESSHSNRDYQREHKGSSLGKNRIGGEITDQSEDDSSSRSHHQPTKLR* 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0899 477 SUPERFAMILY Protein kinase-like (PK-like) 121 416 IPR011009 -
Mtr8g0899 477 MobiDBLite consensus disorder prediction 432 449 - -
Mtr8g0899 477 Gene3D Transferase(Phosphotransferase) domain 1 220 428 - -
Mtr8g0899 477 CDD STKc_IRAK 150 416 - -
Mtr8g0899 477 MobiDBLite consensus disorder prediction 432 477 - -
Mtr8g0899 477 SMART serkin_6 144 422 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g0899 477 ProSitePatterns Serine/Threonine protein kinases active-site signature. 266 278 IPR008271 GO:0004672|GO:0006468
Mtr8g0899 477 Gene3D Phosphorylase Kinase; domain 1 125 219 - -
Mtr8g0899 477 ProSiteProfiles Protein kinase domain profile. 144 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g0899 477 Pfam Protein kinase domain 147 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g0899 477 Coils Coil 164 184 - -
Mtr8g0899 477 MobiDBLite consensus disorder prediction 456 471 - -
Mtr8g0899 477 ProSitePatterns Protein kinases ATP-binding region signature. 150 172 IPR017441 GO:0005524
Mtr8g0899 477 PANTHER OS01G0323000 PROTEIN 1 441 - -
Mtr8g0899 477 PANTHER BNACNNG08720D PROTEIN 1 441 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0899 Mtr-Chr8 11086610 11090217 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g0899 26 472 Trihelix Transcription Factor Family AT5G38560 38.661 4.95e-95 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Mtr8g0899 Pkinase 5.9e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0899 - - gmx:100777348 748.043
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g3832 7 55191590 55196015 Mtr8g0899 8 11086610 11090217 PCT
Mtr7g2037 7 36551684 36555956 Mtr8g0899 8 11086610 11090217 PCT