Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0892 ATGGAGGTAGATTGGGATCTACATGCTGTAGTCAGAGGCTATACCAACCTCACCTCCTCCTCTTCCTCCTCCACCACCACCTCAACAACCACCTTAGCCACCTCATCAACACACTCTTATAATAATAATAATAATAATAATAACTTTTTCTCTATTTATCCTACAGAACAAACAAGTCAAGTTTTTTCACTTTCAAACCCCTTTGAAACTAAAAGTTCCATTGAAGAATTGCATGAACTTTGCAAACCTTTCTTCTTCAAATCATCATCATCATCACAACCTCTCTCTTCTGGTTCTTTCTCTTATTCATCACCATCACCAAAATCACCTCATATACAACCAAAACAGCTTCTGGTTAATAACAAGCTTCATCATCATGCTGCTTCTGCCATCACACCAAGATCCAAAAGAAGGAAGATTCAGCATAAGAAGGTTTGTGAAGTGCAAGCTGAGAAGCTCTCATCAGACATATGGGCATGGAGGAAATATGGTCAAAAACCAATCAAAGGGTCACCATATCCAAGGGGATATTACAGATGTAGCAGTTCAAAAGGATGTTTAGCTAGGAAACAAGTTGAGAGGAACAAATCAGACCCATCAATGTTCATAGTTACATACACTGGTGAACACAGTCACCCTGCTCCAACTCACAGAAATTCTCTTGCTGGTTCAACAAGACAGAAGCCATTGTCCCCACAAACTGTCACTGCTGAAGACTCTTCCCAACAACCCTTTACAAAACAAGTTTCATCATCCACATCAGAAGCTGAAGAGGAAGATGTTACAACACTCTTGAGTGTAAAGTCAGAGAGCAAAGAAGATTTGGAAGAAATGATGAATGATGATGAGGAGGAAAATGAATTTGAGTTATCTGATATGGTTGTAACAGATGATTTCTTTGAAGGTTTAGATGAATTGACAGGTTTTGCTGGAAAAACAGTAGCATCATCTGGTGGTGACTGTTTTGGTGACCCTTTTGCTGCTAGTATTGCTCTTCCTGCTTGTGGTGGCCAATGA 1017 0.3972 MEVDWDLHAVVRGYTNLTSSSSSSTTTSTTTLATSSTHSYNNNNNNNNFFSIYPTEQTSQVFSLSNPFETKSSIEELHELCKPFFFKSSSSSQPLSSGSFSYSSPSPKSPHIQPKQLLVNNKLHHHAASAITPRSKRRKIQHKKVCEVQAEKLSSDIWAWRKYGQKPIKGSPYPRGYYRCSSSKGCLARKQVERNKSDPSMFIVTYTGEHSHPAPTHRNSLAGSTRQKPLSPQTVTAEDSSQQPFTKQVSSSTSEAEEEDVTTLLSVKSESKEDLEEMMNDDEEENEFELSDMVVTDDFFEGLDELTGFAGKTVASSGGDCFGDPFAASIALPACGGQ* 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0892 338 MobiDBLite consensus disorder prediction 208 264 - -
Mtr8g0892 338 Pfam WRKY DNA -binding domain 156 213 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mtr8g0892 338 SUPERFAMILY WRKY DNA-binding domain 151 215 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mtr8g0892 338 Coils Coil 265 292 - -
Mtr8g0892 338 MobiDBLite consensus disorder prediction 18 40 - -
Mtr8g0892 338 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 1 338 - -
Mtr8g0892 338 ProSiteProfiles WRKY domain profile. 149 215 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mtr8g0892 338 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 1 338 IPR044810 GO:0003700
Mtr8g0892 338 MobiDBLite consensus disorder prediction 89 111 - -
Mtr8g0892 338 MobiDBLite consensus disorder prediction 212 260 - -
Mtr8g0892 338 SMART WRKY_cls 154 214 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mtr8g0892 338 Gene3D WRKY domain 138 208 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0892 Mtr-Chr8 10975353 10977698 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g0892 1 317 WRKY Transcription Factor Family AT4G01250 46.130 3.53e-80 244
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mtr8g0892 WRKY 9.1e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0892 K13425 - gmx:100798084 327.405
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g0892 8 10975353 10977698 Mtr1g3697 1 48635377 48637356 ECH
Mtr8g0892 8 10975353 10977698 Mtr8g0892 8 10975353 10977698 ECH
Mtr8g0892 8 10975353 10977698 Mtr7g2052 7 36762157 36763974 ECH
Mtr8g3504 8 45590205 45591690 Mtr8g0892 8 10975353 10977698 ECH
Mtr7g2052 7 36762157 36763974 Mtr8g0892 8 10975353 10977698 PCT