Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0886 ATGGAGTATGCATCCAAATTTGTAGAAAGAGCTGTCGATGTTGTGTTGGACCTGACTGTTCGGCATGTGGGTTACATCTTCTATTACAAGGACAATGTTAGTGAACTAAACAATCTTGTTGAGAAGCTAAGTCTTGAAAGAAAGAGGCTGGAACATCGAGTAGATGAAGCTGAGGATAATCTAGGAATAACCGAAAGTAATGTTGCAGCTTGGCTTCAGAAAGTGGATAAAACTAGAACTGAAACGGAGGAGTTTCAAGATGATGAAGGCCACACGAAGACAAGGTTTTCCAGTGGTTTATTTCATTACCTGAGGAACAGACATAGACTAGGGAGAAAAGCAAAGAAGATGGCAGTGGATGTCAAGTTATTAATAGACGAGTCGAAGTTTGATGGAGTTTCCTATCAGCAAAAGCCAACATCTATGCATGCTGCTTTGTTTAATGATGGCTATGTAGAATTTGGTTCTAGAACATGCACAATTGAAAGGATAATGGAAAAACTAGAAGATTCTACAGCGAGAATGATTGGAGTGCATGGGCCAGGTGGTGTGGGTAAGAGCACTTTAATCAAAGAAATTGTTAAGAAAGCTCAAGTCAAGAAGTTGTTCAATGTGGCAGTTATAGTAGAAATAAATGACAATCCCAATCTGCGAAAAATCCAGGAAGAAATTGCGTACGTGTTAGGATTGAATTTGGAAGGGGAAGGTGAGACTGTGAGAGCAGATCGTCTAAGAAGGAGGTTAAAGAAAGAGAGGGAGAACACCCTTGTCGTCATGGATGACCTTTGGGACAGAATAGACTTGAATAAGATAGGGATTCCATTTGACGATGATATGGACGATGATTCAAGCCGTCTGAAAATTGAAGATATGAAAGATCCTAACTTCACAATGGTGAAAAAAGGAAAATCTCCTGGTGATTATAAAGGGTGTAAAGTTTTGCTAACTTCGAGAGATAGAAAAGTATTGTCTGATAAAATGGACGTCAAGTCAGTTTTCTGTGTAAGGGAATTAGATGATAAGGAATCTCTAATGTTGTTTAAGGAGGAGGCTGGAATACATGCTGAAATGTCCACATTTAAACAGGAGATTGTTAAGAAGTATTGTGCAGGGATACCCATGGCAATTGTTACTGTTGCAAGGGCATTAAGAAATAAGAGCGAGTCAGTGTGGGAAGCCACACTTGAAAAACTTAAAAAAGAGGAACTGAGTGGAGTGCAGAAATCTATGGAGATTTCTGTGAAGATGAGTTATGATCATCTAGAAAGTGAGGAGCTCCGGTCCATTTTCTTACTTTGTGCTCAAATGGGTCATCAACAATTAATTATGGACTTGGTGAAGTATTGCTTTGGATTGGGTATACTTGAAGGGGTCTATACGCTAAGAGAAGCCCGTGATAGAGTATATGCATCAATTCAAAAGCTAAAAGACTCGAGTTTGATGTTGGATTGTAGTTCCAATGATCATTTCAATATGCATGATATGGTTCAAGATGCCGCTTTGTCTATAGCACACAAGGAGAAAAATGTATTTGCTTTGAGAAATGGCAAATTAGATGACTGGCCGGACAAGGATATACTCGAGAGGTGTAGTGCTATCTCTATACGCAACTGTGATATCATTGACGAGCTTCCTAAAGTCATACATTGTCCTCAGCTTAAGTTCTTCCAAATTGACAGCAATGATCCTTCTTTGAAAATACCTGAGAATTTTTTTGTAGGAATGGAAAAACTCAGAATATTAATATTGACTGGTTTTCATTTATCGTGCTTACCATCTTCGATTAAATTCCTATTAAACCTCAGAATGCTTTGTTTGGAGCGGTGTGCTCTAGGTGAAAACTTATCCATCGTAGGAGAGCTGAAAAAATTAAGAATTCTCAGCTTTTCTGGATCTCAAATTGAAAACTTGCCAGCTGAGTTAGGGTTCTTAGATAAGCTACAGTTATTTGACATCAGTGACTGTTCCATAATGAAGGGGGTTTCACCTAATTTTATATCAAGGTTGACATGTTTAGAAGAGTTGTATATAAGAAAGAGCTTGATCAAAGTGGTGGTTGATGGAGAGCCAAACCAAAGTCAAATTTCATTTCTTTCTCAGTTAAAACATTTACACCAATTGAGGGTTGTAGACTTATGCATCCCGAGTGCTGCAGTTTTGCCTAGGGACTTGTTCTTTGACAGGTTAACTGATTACAAAATTGTGATTGGAGACTTCAAGATGCTTTCAGTTGGAGATTTCAGGATGCCAAATAAGTACAAAGCATTAAGATCTTTGGCATTGCTAACAGACGGCACTGACATTCACGCTCAGAAAGGGATAAAGTTGTTGTTTGAAAGAGTTGAAAATTTGTTGTTGGGAGAGCTAAATGGTGTTCAAAATGCATTTTACGAGTTGAATTTGAATGGATTTCCAGATCTCAAACATTTATCCATCATAAATAACAATGGCATTGAATATATTGTTAAGTCCATAGAGCTGCTCAATCCTCAGAATGTTTTTCTCAATTTGGAATCTCTATGCCTCTACAAACTGAGGAAGATAAAGATGCTGTGTTATACTCCAGTTACAGATGCCTCATTTGCCAAATTAAAAACCATCAAGGTCAAGATGTGTACCCAGATGAAGACTCTCTTCTCCTTTTACATGGTTAAATTTCTTGCTAGTCTAGAAACAATTGATGTTTCTGAATGTGATTCTTTGGAGGAGATTGTTGTTAAGGAAGGGCAAGCAAATTTTAATAAGGTTGAGTTTAATAAGCTACGCTCTTTAACACTACAATCGTTACCATTATTTACTAGTTTTTATACCTGTGTTGAGATGCCCTCTACAGAAGAGCAAATAACAAAAAGAGATCACATAGAAATTACTGTTGCAGAAGATGATCACAGTGTCATGGATCCCCTTTCACTCTTTGGTGAACTGATTGAAATTCCAAACCTGGAGAGTTTGAAGTTATCCTCAATCAAAAGTCATAGGATATGGAGAGATCGGCCACTATCAAATTTCTGCTTTCACAATTTAATAAAATTAACTGTGAATGATTGCTATAACTTAAAATACTTATGTTCATTGTCTGTGGCTAGCAATTTTAAGAAATTGAAAGGCCTTTTTATAAGTGATTGTGGGATGATGGAGAAGATTTTTATCACTGAAGGAAACAGTATAGACAAGGTCTGCATCTTTCCTAAGTTGGAGGAAATCCACCTCACCAAACTGAATAGGTTGCAAGATATATGGCAAGTTGAAGTTGGCGCCGATTCCTTTTCTAGTCTCATTTCTGTGCATATTGAAGAGTGTAATAAACTTGACAAGATTTTTCCTAGTCACATGACAGGATGGTTTGGGAGTTTAGATAGCTTGAAGGTTATTAATTGCATGTCAGTGGAAGTGATTTTTGAAATCAAAGATTTTCAACAAATGGATGCATCTAGGATGGACACAAACTTGCAGCTTATTGTGGTAGAGCAACTACTAAACCTGAAGCAAGTATGGGACAGAGATCCACAAGGAATTCTTAGGTTCAAAAATCTGCGGAATATAAAGGTTTTAAATTGTAATCAGCTAGGCTATGTCTTGCCAGCTTCTGTGGCCAAAGATCTAAAAAGGCTTGAAGGCATTTCGCTAAATATTTGTGATAGAATGGAGGAAATTGTTGCTTGGGATGATGGACCACAAACACGATTAGTGTTTCCTGAAGTAACCTTCATGAAACTTTATGGCCTGCCAAAAGTTAAGCGTTTCTATAAGGAGGGACATATAGAATGTCCAAAACTGAAGCAGTTGGCTGTGGACTTTTGTGAGAAGCTGGACATGTTCACAGCAGAAACCACAAATGAAGAAAGACAAGCAGTTTTCTTAGCTGAAAAGGTAATTTCCAACTTGGAGTTCATGGAAATTGGCTTAAAGGAAGCATTGTGGTTAAAGAGCAACAAATGGAAGTACCGAATGGACTGTATGAAAGAGCTTAGCTTGCGCTTATTGGAGAGTATTGAACTTCTCTACTGGTTTCTGGACAGAATGCCTAATCTAGAAAGGCTAAACTTGCTTTTCCCTTATACGTTGGAAGAGTTAGTACCAAGTGAAAACATAGCACCACAAGAAAGATTGGGAACTGTATTACAGCTCAAGACATTGTATTTGCGGTCATCAGTGATAAAGGATCTAGGATTTGACCGAGACCCACTTCTACAAAGACTAGAGCATTTGCTCTTACTTGACTGCCACAGTTTGGTCACTTTAGCACCTTCCTCTCTATCTTTGACTCACTTAACATATTTGGAAGTAAACTCTTGTCGTGGATTAATGAATTTAATGGCAATCTCAACAGCTAAAAGCATGGCTCAACTTGCAAAAATGAAGGTAATCGAATGTAGCGTACAGGAATTGGTAACCAATGAGGGAAATGAAGAAGACAGAGTGATTGAAGTTGTATTTAGCAAATTGGTATTTTTAGAGCTGGTAAGATTAGAAAACCTTACAAGTTTCTGCAGCTACAAGAACTGTGAATTTAAATTTCCATCATTGGAAATATTGATTGTGAGAGATTGCCTCAAAATGGAAACATTCACTGTGGGTCAGACAACAGCACCAAAGCTACAAAATATACACACCATTGGAGGAGAAGAGGAAGAGAAACAATATTGGGAAGGTGACTTGAATTCCACTATACAGAAAGTTTTCAAAGACAAGATTTTTTTCAGATATACAGAGAAACTGAACCTTTATGATCATCCTGAATTATTAGAACAAGTATGGCATTGCAGTGATTTGGTGCATGAGTACATGTTTCACAACTTGACATCTTTGGTGGTATCACAATGTAACAATCTAGTGCACGTAATTCCATCTCATTTACTTCCTTGCTTTGATAATTTGGAGGAGTTACACGTAACGAGGTGCAGTGCTGTGAAAGTCATATTTAATATAAATGATGCAAGGGCCACAAAAGCAATGGGAACATTTCGCTTGAAAAAATTGTTTTTTTCTGATCTACCAATCCTGGAGCATGTATGGGACAAAGACCCTGAAGGAAATTTTTGCCTTCAAGTGCTACAAGAAATGAATGTTTTTGAATGTGATACCCTTAAATATTTGTTTCCTGCATCGGTGGCTAAAGATCTTACTAGACTTGAGCTGCTTAGAGTAACACGCTGTAAAGAGTTGGTAGAAATATTTTCAGAGGATGAAATACCTGCAGAAGGAGCAACAAAAGAGTTAATGTTTCCTTCTCTGACCTCATTGTACATAATAAAATTGCCAGCGCTCAAATACTTTTATCGTGGTTTACATAAGCTAGAATGGCCCATGCTAAAAGAATTGCATGCATATCGGTGTAACTTAGTGATACTCGAATGTCAAGAAGATCATCCAGAGGAGCAAGCCCTTGTTCCAGTTGAAAAGATTCCTAGTATGAAGCATTTATCATTTGGTATTGGAGACACCGAGGTTACATGGAATCCGAAGTCTTGTAAATTACAATTTGAAAAACTGGAATGCTTTCAACAAGAGTCAGATAGTGTTCTATATCGGTTCCTTGGCATGTTACCCATTATAAGAAAGTTGGAATTCAGATATGGTTTACTTGAAGAGTTGTTCTCTGCTGAAAGACCTAATGCTGATTACACAAGATTCCTCTTGCACCTCAAAGAAATAGAGTTAAATAAGATTTTTAATCTCAACTCCATTGGTTTAGAGCACTCTTGGCTACACCCCATTCTTGAAAATCTCCAAACATTAGAAGTAAGACGCTGCTATCGTTTAATAAACTTGGTACCAGACATGGTATCTTTCTCCAGCCTCACATATTTGGATGTAAGTATATGTAGTGGAATGCTATATCTGTTTACATCGTCAACAGCCAAAAGTCTGTGCCGACTCAAAGTAATGAAGATAGAATCGTGTGAATCAATGCAAGAGATATTGTCCACAGAGGGGGATGAATCAGGTGAAGATAAAAAGTTAATATTTGAGGACCTCCAGACTTTGTTTCTAAAAGATTTATCAAAGCTAAGGTGCTTTTACCCTGGGAAGTTTTCCTTGTGCTTTCCATCCTTGGAGAAAGTGTCCTTGATTCAATGCATCTGGATGAAAACTTTCAGTCCAGTCAACATGATAGATCCGACCAAATTGTCTTCTGGAGTTACATTCATCAAAGATAAAACCCCACAATGGGAAGGTGATCTGAATGCTACAATACGCAAGAGGTTTGAGGAAGAGATTTCTGGTTATGCACCAAAAGGAACTGTTGTGAGTCTCTTTGATGAACCAGTACTACAGGATGTATGGCATGGCTTGCCAGTCCCACAATCTTGCTTTGGAAATTTGGAGGAATTAATTGTGGACGGGTGCCAATTTTTATCCGAAGTACTACCATCCAATTTACTTCCTTTCTTAACAAAAATGGAAAAATTGGCAGTTCGAAATTGTAGTTCTGTGAAAACCATATTTGATGTGAGACGTATAACAGAAGACAGAAAAATGAAAACCAAGGGACCAGCCCTGATGCCCTTCCCTTTTTCCCTGAAGGTATTGACTTTAGAGCAGTTGCCAAATTTGGAGAATGTTTGGAATGAAGATCCTCATGGAATTCTAACAATTGAACTTCTAAAACAAGTATATGTTGATGACTGTAAAGGCCTTATAAGTTTGTTCCCAGCCTCAGTAGCCAAAGATCTTGTGAAACTTGAAGATCTACACGTGAAACACTGTGAAGAGCTGATGGTTATTGTTGCAGAGAATAATGCATATCCCAAAGGAACAATTTTGGAGAGTTTTGCATCTCATGAAGTTGATGCATCGGATGAGGTTGAAAAGATAATATTTGAGGAGCTCCAGGCTTTGTATCTTAAAGATTTACATGAACTCAAGTGCTTTTATTCAGGGAATTTTACTCTGTGTTTTCCATCCTTGGAGCACGTGTTTGTAATCAACTGTCACAAAATGGAAACTTTCTGTCCAGGTACCATCAATGCACACAAGTTGTTGGAAGTTAAATTTCAGGATATCTCAGATGCTGTCCCATTGGAAATTGACCTCAATTCTACCATACAGAAGGAGTTTCTGGCACAAGCTGACCCAAATAACTCGGTTAGACCATAA 7101 0.3785 MEYASKFVERAVDVVLDLTVRHVGYIFYYKDNVSELNNLVEKLSLERKRLEHRVDEAEDNLGITESNVAAWLQKVDKTRTETEEFQDDEGHTKTRFSSGLFHYLRNRHRLGRKAKKMAVDVKLLIDESKFDGVSYQQKPTSMHAALFNDGYVEFGSRTCTIERIMEKLEDSTARMIGVHGPGGVGKSTLIKEIVKKAQVKKLFNVAVIVEINDNPNLRKIQEEIAYVLGLNLEGEGETVRADRLRRRLKKERENTLVVMDDLWDRIDLNKIGIPFDDDMDDDSSRLKIEDMKDPNFTMVKKGKSPGDYKGCKVLLTSRDRKVLSDKMDVKSVFCVRELDDKESLMLFKEEAGIHAEMSTFKQEIVKKYCAGIPMAIVTVARALRNKSESVWEATLEKLKKEELSGVQKSMEISVKMSYDHLESEELRSIFLLCAQMGHQQLIMDLVKYCFGLGILEGVYTLREARDRVYASIQKLKDSSLMLDCSSNDHFNMHDMVQDAALSIAHKEKNVFALRNGKLDDWPDKDILERCSAISIRNCDIIDELPKVIHCPQLKFFQIDSNDPSLKIPENFFVGMEKLRILILTGFHLSCLPSSIKFLLNLRMLCLERCALGENLSIVGELKKLRILSFSGSQIENLPAELGFLDKLQLFDISDCSIMKGVSPNFISRLTCLEELYIRKSLIKVVVDGEPNQSQISFLSQLKHLHQLRVVDLCIPSAAVLPRDLFFDRLTDYKIVIGDFKMLSVGDFRMPNKYKALRSLALLTDGTDIHAQKGIKLLFERVENLLLGELNGVQNAFYELNLNGFPDLKHLSIINNNGIEYIVKSIELLNPQNVFLNLESLCLYKLRKIKMLCYTPVTDASFAKLKTIKVKMCTQMKTLFSFYMVKFLASLETIDVSECDSLEEIVVKEGQANFNKVEFNKLRSLTLQSLPLFTSFYTCVEMPSTEEQITKRDHIEITVAEDDHSVMDPLSLFGELIEIPNLESLKLSSIKSHRIWRDRPLSNFCFHNLIKLTVNDCYNLKYLCSLSVASNFKKLKGLFISDCGMMEKIFITEGNSIDKVCIFPKLEEIHLTKLNRLQDIWQVEVGADSFSSLISVHIEECNKLDKIFPSHMTGWFGSLDSLKVINCMSVEVIFEIKDFQQMDASRMDTNLQLIVVEQLLNLKQVWDRDPQGILRFKNLRNIKVLNCNQLGYVLPASVAKDLKRLEGISLNICDRMEEIVAWDDGPQTRLVFPEVTFMKLYGLPKVKRFYKEGHIECPKLKQLAVDFCEKLDMFTAETTNEERQAVFLAEKVISNLEFMEIGLKEALWLKSNKWKYRMDCMKELSLRLLESIELLYWFLDRMPNLERLNLLFPYTLEELVPSENIAPQERLGTVLQLKTLYLRSSVIKDLGFDRDPLLQRLEHLLLLDCHSLVTLAPSSLSLTHLTYLEVNSCRGLMNLMAISTAKSMAQLAKMKVIECSVQELVTNEGNEEDRVIEVVFSKLVFLELVRLENLTSFCSYKNCEFKFPSLEILIVRDCLKMETFTVGQTTAPKLQNIHTIGGEEEEKQYWEGDLNSTIQKVFKDKIFFRYTEKLNLYDHPELLEQVWHCSDLVHEYMFHNLTSLVVSQCNNLVHVIPSHLLPCFDNLEELHVTRCSAVKVIFNINDARATKAMGTFRLKKLFFSDLPILEHVWDKDPEGNFCLQVLQEMNVFECDTLKYLFPASVAKDLTRLELLRVTRCKELVEIFSEDEIPAEGATKELMFPSLTSLYIIKLPALKYFYRGLHKLEWPMLKELHAYRCNLVILECQEDHPEEQALVPVEKIPSMKHLSFGIGDTEVTWNPKSCKLQFEKLECFQQESDSVLYRFLGMLPIIRKLEFRYGLLEELFSAERPNADYTRFLLHLKEIELNKIFNLNSIGLEHSWLHPILENLQTLEVRRCYRLINLVPDMVSFSSLTYLDVSICSGMLYLFTSSTAKSLCRLKVMKIESCESMQEILSTEGDESGEDKKLIFEDLQTLFLKDLSKLRCFYPGKFSLCFPSLEKVSLIQCIWMKTFSPVNMIDPTKLSSGVTFIKDKTPQWEGDLNATIRKRFEEEISGYAPKGTVVSLFDEPVLQDVWHGLPVPQSCFGNLEELIVDGCQFLSEVLPSNLLPFLTKMEKLAVRNCSSVKTIFDVRRITEDRKMKTKGPALMPFPFSLKVLTLEQLPNLENVWNEDPHGILTIELLKQVYVDDCKGLISLFPASVAKDLVKLEDLHVKHCEELMVIVAENNAYPKGTILESFASHEVDASDEVEKIIFEELQALYLKDLHELKCFYSGNFTLCFPSLEHVFVINCHKMETFCPGTINAHKLLEVKFQDISDAVPLEIDLNSTIQKEFLAQADPNNSVRP* 2367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0886 2366 Gene3D Ribonuclease Inhibitor 964 1268 IPR032675 -
Mtr8g0886 2366 SUPERFAMILY L domain-like 492 935 - -
Mtr8g0886 2366 PANTHER - 1966 2240 - -
Mtr8g0886 2366 PANTHER - 1 1887 - -
Mtr8g0886 2366 PANTHER - 2264 2338 - -
Mtr8g0886 2366 PANTHER - 1891 1965 - -
Mtr8g0886 2366 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 152 433 IPR027417 -
Mtr8g0886 2366 Gene3D - 337 422 IPR042197 -
Mtr8g0886 2366 SUPERFAMILY RNI-like 1333 1726 - -
Mtr8g0886 2366 SMART AAA_5 172 343 IPR003593 -
Mtr8g0886 2366 Gene3D Ribonuclease Inhibitor 1304 1545 IPR032675 -
Mtr8g0886 2366 Gene3D Ribonuclease Inhibitor 1821 2040 IPR032675 -
Mtr8g0886 2366 Gene3D Ribonuclease Inhibitor 1595 1795 IPR032675 -
Mtr8g0886 2366 Gene3D Ribonuclease Inhibitor 2092 2249 IPR032675 -
Mtr8g0886 2366 PANTHER RPP4C4 1891 1965 - -
Mtr8g0886 2366 PANTHER RPP4C4 1966 2240 - -
Mtr8g0886 2366 PANTHER RPP4C4 2264 2338 - -
Mtr8g0886 2366 PANTHER RPP4C4 1 1887 - -
Mtr8g0886 2366 SUPERFAMILY RNI-like 1902 2238 - -
Mtr8g0886 2366 Coils Coil 33 67 - -
Mtr8g0886 2366 Gene3D Ribonuclease Inhibitor 530 945 IPR032675 -
Mtr8g0886 2366 SUPERFAMILY L domain-like 977 1271 - -
Mtr8g0886 2366 PRINTS Disease resistance protein signature 175 190 - -
Mtr8g0886 2366 PRINTS Disease resistance protein signature 249 263 - -
Mtr8g0886 2366 PRINTS Disease resistance protein signature 369 383 - -
Mtr8g0886 2366 PRINTS Disease resistance protein signature 885 901 - -
Mtr8g0886 2366 Pfam NB-ARC domain 160 278 IPR002182 GO:0043531
Mtr8g0886 2366 Pfam NB-ARC domain 308 419 IPR002182 GO:0043531
Mtr8g0886 2366 Gene3D - 140 332 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0886 Mtr-Chr8 10891508 10913183 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g0886 156 507 WRKY Transcription Factor Family AT5G45050 25.137 1.35e-06 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0886 - - mtr:MTR_8g028500 4413.99