Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0880 ATGGCTGACGAATCGGAGAAAAGCACCGTGACGGTGGATCGTGACGGCGGCGATTCTTTGCTTGAGAAGATCACCGAGAAGCTTCACTTTGAGGATGATTCTTCCTCCGATTCTGATTCTCATTCTCATTCTGAGTTGGATAAGAAACCGGTTATTGAATCGGTGAAGGAGAAGGTTTTTCGCCTCTTTGGAAGGGAGAAGCCTGTTCATTCCGTCCTCGGCGGCGGAAAGCCTGCTGATGTGTTCTTGTGGAAGAACAAGAAGTTATCTGCTGGTACACTCGCGACAGCAACTGCTATTTGGGTGTTTTTTGAGCTGCTTGAATACCATTTTCTCACTCTCATTTGTCACATTTCGATTCTGGTTCTTGCACTATTGTTTTTGTGGTCCAATGCTCATACCTTTGTTCACAAGACTCCACCTCACATCCCAATTGTTCATCTTCCTGAGGAACCATTTCTGCAGATTGCTTCTGCATTGAGAATTGAAATCAACCGAGGATTCTCTGCCTTGCGTGATATTGGTACTGGAAAAGATGTGAAGAAATTCCTCATTGTAATTTTTGGCTTGTGGATTCTATCGATTGTTGGTAGCTGGAGCAATTTCTTGACCCTGTTCTACATAACTTTTGTTTTGTTGTTCACGGTGCCTTTTGTGTATGACAAGTACGAGGACAAGATAGACCCCCTGGCAGAAAAGGCATTCATCGAGATTAAAAAACAGTATGCTGTGTTTGACGAAAAGGTCTTGAGCAAGGTCTTGAGTAAGATCCCAAAAGGTGTGTTGAAGGGAAAATTAGCTTAG 804 0.4353 MADESEKSTVTVDRDGGDSLLEKITEKLHFEDDSSSDSDSHSHSELDKKPVIESVKEKVFRLFGREKPVHSVLGGGKPADVFLWKNKKLSAGTLATATAIWVFFELLEYHFLTLICHISILVLALLFLWSNAHTFVHKTPPHIPIVHLPEEPFLQIASALRIEINRGFSALRDIGTGKDVKKFLIVIFGLWILSIVGSWSNFLTLFYITFVLLFTVPFVYDKYEDKIDPLAEKAFIEIKKQYAVFDEKVLSKVLSKIPKGVLKGKLA* 268
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0880 267 PANTHER RETICULON-LIKE PROTEIN 1 266 - -
Mtr8g0880 267 PANTHER RETICULON 1 266 IPR045064 GO:0009617
Mtr8g0880 267 Pfam Reticulon 79 234 IPR003388 -
Mtr8g0880 267 ProSiteProfiles Reticulon domain profile. 78 267 IPR003388 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Mtr8g0880 Mtr-Chr8 10846495 10849052 Dispersed/Wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0880 - - mtr:MTR_8g028450 518.464
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g0880 8 10846495 10849052 Mtr1g3691 1 48589672 48592004 ECH
Mtr8g0880 8 10846495 10849052 Mtr8g0880 8 10846495 10849052 ECH
Mtr7g2102 7 37246104 37253369 Mtr8g0880 8 10846495 10849052 PCT