Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0863 ATGCCGAAGAACAAGGGAAAGGGAGGAAAGAATCGCAAGAGAGGAAAGAACGAAGCCGATGACGAAAAGCGTGAGCTTGTTTTCAAGGAAGATGGTCAAGAATACGCACAGGTTCTTCGTATGCTTGGAAACGGTCGTTGTGAAGCGATGTGTATCGATGGAACAAAGCGTCTCTGTCATATCCGTGGAAAGATGCACAAGAAGGTTTGGATTGCTGCTGGGGATATTATTCTTGTTGGGTTGCGTGATTATCAGGATGATAAGGCTGATGTGATCTTGAAGTATATGCCGGATGAGGCCAGATTGTTGAAGGCGTATAGCGAGCTTCCGGATAGTGTGAGGCTTAATGAAGGAATTGGTGGTGGGATTGATGGGGATGATGATGAGGGTGATGGGAATGATTATATTGAGTTTGAAGATGAGGATATTGATAAGATTTGA 441 0.4444 MPKNKGKGGKNRKRGKNEADDEKRELVFKEDGQEYAQVLRMLGNGRCEAMCIDGTKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYSELPDSVRLNEGIGGGIDGDDDEGDGNDYIEFEDEDIDKI* 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0863 146 Pfam Translation initiation factor 1A / IF-1 32 93 IPR006196 GO:0003723|GO:0003743|GO:0006413
Mtr8g0863 146 PANTHER EIF-1A 1 146 IPR001253 GO:0003743|GO:0006413
Mtr8g0863 146 MobiDBLite consensus disorder prediction 1 25 - -
Mtr8g0863 146 MobiDBLite consensus disorder prediction 117 146 - -
Mtr8g0863 146 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 1A 1 146 - -
Mtr8g0863 146 Gene3D - 2 146 IPR012340 -
Mtr8g0863 146 ProSitePatterns Eukaryotic initiation factor 1A signature. 41 63 IPR018104 GO:0003743|GO:0006413
Mtr8g0863 146 CDD S1_IF1A 33 109 IPR001253 GO:0003743|GO:0006413
Mtr8g0863 146 Hamap Translation initiation factor 1A [eif1a]. 16 110 IPR001253 GO:0003743|GO:0006413
Mtr8g0863 146 SMART eIF1neu4 28 110 IPR001253 GO:0003743|GO:0006413
Mtr8g0863 146 ProSiteProfiles S1 domain IF1 type profile. 22 96 IPR006196 GO:0003723|GO:0003743|GO:0006413
Mtr8g0863 146 MobiDBLite consensus disorder prediction 122 146 - -
Mtr8g0863 146 TIGRFAM eIF-1A: translation initiation factor eIF-1A 14 109 IPR001253 GO:0003743|GO:0006413
Mtr8g0863 146 SUPERFAMILY Nucleic acid-binding proteins 2 142 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0863 Mtr-Chr8 10575982 10576758 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g0863 1 146 Eukaryotic Initiation Factors Gene Family AT2G04520 86.986 2.30e-85 244
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0863 K03236 - pda:103697054 252.677
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g0863 8 10575982 10576758 Mtr8g0863 8 10575982 10576758 ECH