Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0859 ATGGGAAACAGTGAGGATGGGAAATCCATTAAGACTGAAAGACCTTCTTCACCTGTAGCAACTGATCAGACCGATCAAGCCAACCCATCGAACATGCATGTCTATCCTGATTGGGCTGCCATGCAGGCATATTATGGGCAAAGAGTCAACATTCCTCCATATTTCAACTCGGCTGCTGCTCCTGGTCATGCTCCTCACCCATACATGTGGGGACCACCACAGCCTATGATGCATCCATATGGGCCGCCATATGCACCACCATTTTATTCACATGGAGGGGTTTATACTCATCCTGCCGTTGCCATCGGGTCAAATTCAAATGGTCAAGGAATTTCATCTTCACCTGCTGCTGGGACTCCTACAAGCATAGAGACACCGACCAAATCATCTGGAAACACTGATCAGGGTTTAATGAAAAAATTGAAAGGATTTGACGGGCTTGCAATGTCAATAGGCAATGGCAATGCTGAAAGTGCTGAGCGTGGAGCTGAAAACCGGCTATCACGGAGTGTGGATACTGAGGGTTCCAGCGATGGAAGCGATGGCAACACTACAGGGACCAATGGAACAAGGAAAAGAAGCCGGGATGGGACACCAACAACCACTGATGGAGAAGGGAAAACTGAGATGCCAGATAGTCAAGTTTCCAAAGAGACTGCTGCTTCCAAAAAGACAGTGTCAGTTATCACAAGCAGTGCTGCAGAAAATATGGTTGGACCTGTACTTTCTTCAGGTATGACCACATCACTGGAACTGAGGAACCCTTCACCTATTTCCACCAGTGCTCCACAACCTTGTGGAGTTTTGCCTCCTGAAGCTTGGATGCAGAATGAGCGTGAGCTGAAACGTGAGAGGAGGAAACAATCAAATCGTGAATCTGCTAGAAGATCCAGGCTTAGGAAGCAGGCTGAGGCTGAAGAATTGGCACGAAGAGTCGATGCGTTGACTGCTGAGAATTTGGCGCTGAAATCAGAAATGAATGAATTGGCTGAAAATTCGGCGAAGCTGAAGATTGAAAATGCTACATTAAAGGAAAAGCTGGAAAACACTCAACTGGGACAAACAGAAGAGATAATTTTGAACGGCATGGACAAGAGGGCTACACCTGTAAGTACAGAAAACTTACTGTCAAGAGTTAATGATTCCAATTCTGATGATAGAGCTGCAGAGGAAGAAAATGGTTTCTGTGAGAACAAACCCAATTCTGGTGCAAAGCTGCGTCAACTACTCGACACAAATCCTAGAGCTAATGCTGTGGCCGCTAGTTGA 1269 0.4626 MGNSEDGKSIKTERPSSPVATDQTDQANPSNMHVYPDWAAMQAYYGQRVNIPPYFNSAAAPGHAPHPYMWGPPQPMMHPYGPPYAPPFYSHGGVYTHPAVAIGSNSNGQGISSSPAAGTPTSIETPTKSSGNTDQGLMKKLKGFDGLAMSIGNGNAESAERGAENRLSRSVDTEGSSDGSDGNTTGTNGTRKRSRDGTPTTTDGEGKTEMPDSQVSKETAASKKTVSVITSSAAENMVGPVLSSGMTTSLELRNPSPISTSAPQPCGVLPPEAWMQNERELKRERRKQSNRESARRSRLRKQAEAEELARRVDALTAENLALKSEMNELAENSAKLKIENATLKEKLENTQLGQTEEIILNGMDKRATPVSTENLLSRVNDSNSDDRAAEEENGFCENKPNSGAKLRQLLDTNPRANAVAAS* 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0859 422 Pfam G-box binding protein MFMR 1 100 IPR012900 -
Mtr8g0859 422 MobiDBLite consensus disorder prediction 14 31 - -
Mtr8g0859 422 MobiDBLite consensus disorder prediction 106 138 - -
Mtr8g0859 422 MobiDBLite consensus disorder prediction 106 136 - -
Mtr8g0859 422 SUPERFAMILY Leucine zipper domain 281 337 IPR046347 GO:0003700|GO:0006355
Mtr8g0859 422 Coils Coil 291 346 - -
Mtr8g0859 422 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 280 343 IPR004827 GO:0003700|GO:0006355
Mtr8g0859 422 MobiDBLite consensus disorder prediction 152 307 - -
Mtr8g0859 422 CDD bZIP_plant_GBF1 283 331 IPR045314 GO:0003700|GO:0006355
Mtr8g0859 422 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 422 IPR044827 GO:0003700|GO:0006355|GO:0043565
Mtr8g0859 422 SMART brlzneu 278 342 IPR004827 GO:0003700|GO:0006355
Mtr8g0859 422 MobiDBLite consensus disorder prediction 203 263 - -
Mtr8g0859 422 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 285 300 IPR004827 GO:0003700|GO:0006355
Mtr8g0859 422 Gene3D - 281 334 - -
Mtr8g0859 422 MobiDBLite consensus disorder prediction 1 32 - -
Mtr8g0859 422 PANTHER G-BOX-BINDING FACTOR 3 1 422 - -
Mtr8g0859 422 MobiDBLite consensus disorder prediction 276 307 - -
Mtr8g0859 422 Pfam Disordered region downstream of MFMR 134 259 - -
Mtr8g0859 422 Pfam bZIP transcription factor 278 340 IPR004827 GO:0003700|GO:0006355
Mtr8g0859 422 MobiDBLite consensus disorder prediction 169 195 - -
Mtr8g0859 422 MobiDBLite consensus disorder prediction 370 422 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0859 Mtr-Chr8 10543187 10548648 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g0859 1 421 bZIP Transcription Factor Family AT2G46270 50.351 7.17e-108 320
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Mtr8g0859 MFMR_assoc 9.5e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0859 K09060 - gmx:778133 598.201
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g0859 8 10543187 10548648 Mtr8g0859 8 10543187 10548648 ECH