Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0854 ATGCCTATATGCTTGCATGCAGATGGTAATACAAATATCTTGAAATGGAATGAGAGACTCAAAATTGCGGTTGATGCAGCACATGGATTGGAATATCTACATGATGGATGTAAACCACCGATTATGCATAGGGATTTGAAGCCTGCCAACATATTACTAGACGAGAATATGCATGCCAAGATAGCTGATTTTGGCCTAAGTAGAGCTTTTGGTAACGATATTGATTCTCATATATCCACCCGACCTGCTGGTACACCAGGTTATATTGATCCTAAATATCAGAGAACAGGAAACACAAATAAAAAAAATGATATCTACAGCTTTGGAATTATTTTATTTGAGTTGATCACCGGTCGAAAAGCAGTAGCAAGAGCATCTGATGAATACATTCACATACTTCAATGGGTTATTCCCATAGTTGAAGGAGGAGATATTCAAAATGTTGTTGATCCAAAGTTGGAGGGTGAATTTAACATCAATTCAGCATGGAAAGCTGTAGAGATTGCCATGTCATGCACATCATCAAATGAAGTTGAAAGACCAGACATGAGTCAAATATTGGGAGAGTTAAAGGAATGTCTATCTTTTGAGACGGTTCAGATAAATAATGTAAGCACGAGAGCTAGAGATGAATTGGTTTCTATAGCTACTATATCAGAAACCACTATTTTAGCTAGATAA 681 0.3686 MPICLHADGNTNILKWNERLKIAVDAAHGLEYLHDGCKPPIMHRDLKPANILLDENMHAKIADFGLSRAFGNDIDSHISTRPAGTPGYIDPKYQRTGNTNKKNDIYSFGIILFELITGRKAVARASDEYIHILQWVIPIVEGGDIQNVVDPKLEGEFNINSAWKAVEIAMSCTSSNEVERPDMSQILGELKECLSFETVQINNVSTRARDELVSIATISETTILAR* 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0854 226 PANTHER OS07G0107800 PROTEIN-RELATED 9 223 - -
Mtr8g0854 226 Gene3D Transferase(Phosphotransferase) domain 1 4 215 - -
Mtr8g0854 226 ProSitePatterns Serine/Threonine protein kinases active-site signature. 41 53 IPR008271 GO:0004672|GO:0006468
Mtr8g0854 226 SMART serkin_6 1 194 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g0854 226 ProSiteProfiles Protein kinase domain profile. 1 194 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g0854 226 SUPERFAMILY Protein kinase-like (PK-like) 12 190 IPR011009 -
Mtr8g0854 226 Pfam Protein kinase domain 17 187 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g0854 226 PANTHER LRR RECEPTOR-LIKE KINASE PLANT-LIKE PROTEIN 9 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0854 Mtr-Chr8 10510345 10511645 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g0854 13 218 Receptor kinase-like Gene Family AT2G28970 50.971 2.01e-69 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Mtr8g0854 Pkinase 3.8e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0854 - - mtr:MTR_8g015040 354.755