Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0846 ATGGCTAATTTCTACAACATTCACTACCTCTTCACCCTTATCATCTTGCTCAATATTTTCACATCTACTAATTCATGGGATGACCCTTTTTACCTATACCAATATTGCTCAAGCAATAGAACAGCATCCAATACTTCCTTTCAATTTGACCTCACAACCCTCCTCTCTTCCTTATCATCCAATGCTACAACCAACACACAATTTTACAACACAACATTCATTGGAAACAACCCTTCTGACACAATCTATGGTATGTTCTTATGTAGGGGTGATGTTCCCTCTCAACTTTGTCAACAATGTATAGTAAATGCAACACAAAGACTTTCCTTAGAATGTTCTTTGTCAAAAGAAGGTGTTGTTTGGTATGATGAATGTATGGTTTGGTATTCCACAACCTTGGCAGCAACATCAACTAGTTTTTACTTGTTGAATACAAATAAAGTCTCAAACACACAAAATTTCATGAGTTTATTGTTTTCTACAATGAACAAAACCTCAAATGAAGCAGCTTTTGGTGACAAAAAATATGCATCTAATGAAATAACTATATCAAAATTTCAAACCCTTTATTGTTTAGCTCAATGCACACCAAATTTGTCACCACATGATTGTAGAACTTGTCTAAGTGGATTGATAGAGAAACTTCCATTGTGTTGTGAAGGAAGAGTTGGAGGGAGAGTTCTGAATCCAAGTTGTAATATTAGGTATGAATTTTACCCTTTTTATCTATCCAATAGTATTGGTTCATCAATAGATACTACATCACAACAAATTCTACTTCCACAAACAAAAACTTCAGAACACCCTTTTTACCTTTCACACAATTGTTCAAGTAATAACAAAACCTTCACTTTTAACAACACTTTCAAAGTTCACCTTACAACCCTTTTTTCTTACTTGTCTTCTAATGCCACTAAAAGCATATTTCATAAAGATGATGTGGATGGTACAATATTTGGACTCTTCATGTGTCGTGGTGATGTTCCCTTTTACTTATGTGAACAATGTGTGCAAAATGCAACACATAAAATAACCCAAAAGTGTAACATTTTTCAAGAGGGTATAATATGGTTTAATCAATGCATGATTAGATATTCCTATTGGAATTTCTTCTCTTTAGTGGACAAAAGTCATGTGTATCATGAAATGAATGTTACTGGTGATTCTAGTCCCAAAAAGGAGAGAAACTTGTATAATTTTGTAATATCAAATGCCTTATCAAAAGTGGCAATTGTGGCTGGGGATAGTGATAAGAGATATGGAACAAAATCATTGAAATTGAATGATTTGCAAACACTTTATACACTTGGTCAGTGTACACAAGATTTATCAAGTGATGATTGCAAGGCTTGTTTGAGTGATATTATTGGAAATGCAATTCCTTGGTCTTATTTGGGAAGTGTAGGTGGAAGAGTTTTATATCCTAGTTGCAATATGAGGTTTGAATTGTTCCAATTTTACAAAGAAATTGACCAAGGTATCATTAGTCATTCTCCAAAAGAAAAAAGAAGAAACTTGCCACGAACAATTACCTTGATTGTTGTGCTCCCAATTGTTTCAGTGATACTCTTCTTTGTTGGCTGCTATTTGCCAAAGAGAAAAGCAAGAAAGAGTTTTAGGGCTATTCTCAGAGAAAATTTTGGTCATGAAGGTGCAACTTTAGAGCCATTACAATTTGACTGGGATGTAATTGAGGCAGCAACCAACCACTTTTCAAATAAAAATTTCATTGGCAAAGGTGGATTTGGAGAAGTTTACAAGGGCATTCTTTTGGATGGACGACAAATAGCAGTAAAAAGACTTTCAAGAACCTCTACTCAAGGTGTAAATGAGTTCAAGAATGAAGTTTTGTTGATCGCCAAGCTTCAACATAGAAATCTAGTCACATTCATCGGCTTTTGCCTTGAAGAAGAGGAGAAAATACTTATATATGAATATGTGCCGAACAAGAGTCTTGATCACTTTTTATTTGACTTTCAACGAACAAAATTCTTAAGTTGGTTTGAACGTTACAATATTATAAGAGGAATTGCTCAAGGAATTATCTATTTACATGAACATTCTCGACTCAAAGTTATTCACCGTGACCTCAAACCTAGTAATATTTTATTAGATGAAAATATGATTCCAAAAATATCAGATTTTGGTCTTGCTAGAATTGTTGAATTAAACCAAGACAAAGGAAACACAAATAGGATCGTCGGAACATTAGGTTATATATCTCCAGAATATGCAATGCTTGGACAATTTTCGGAGAAATCTGATGTTTATAGTTTTGGAGTCATGATTTTGGAAATTATTACTGGAAAGAAGAACATAAGGTCTTATGAATCACATGTTGGTGATAGCCTCCTAAGTAATGTTTGGAGACAATGGAGTGATCAAATAACATTAAGTATATTGGACCAAAATATTAAAGGAACTTATTCTGAATATGAGGTCATCAAATGCATTCAGATTGGTTTATTATGTGTTCAACAGTTCCCTGATGATAGACCAACAATGGTAACAATTGTTTCATATCTTAACAATGACTTCAATGAATTGCCAACTCCTCAAAAACCTGCATTTTTGTTTCATGGTCAAATGGATACAAAAGGGATTCCACAAGATTCAAGTTCTAGTCAGTCTATCAATACTTGCACACCTTTGACGTTCAACGACTTGTCTATAACCGAATTTCTTCCTCGTTAA 2694 0.3393 MANFYNIHYLFTLIILLNIFTSTNSWDDPFYLYQYCSSNRTASNTSFQFDLTTLLSSLSSNATTNTQFYNTTFIGNNPSDTIYGMFLCRGDVPSQLCQQCIVNATQRLSLECSLSKEGVVWYDECMVWYSTTLAATSTSFYLLNTNKVSNTQNFMSLLFSTMNKTSNEAAFGDKKYASNEITISKFQTLYCLAQCTPNLSPHDCRTCLSGLIEKLPLCCEGRVGGRVLNPSCNIRYEFYPFYLSNSIGSSIDTTSQQILLPQTKTSEHPFYLSHNCSSNNKTFTFNNTFKVHLTTLFSYLSSNATKSIFHKDDVDGTIFGLFMCRGDVPFYLCEQCVQNATHKITQKCNIFQEGIIWFNQCMIRYSYWNFFSLVDKSHVYHEMNVTGDSSPKKERNLYNFVISNALSKVAIVAGDSDKRYGTKSLKLNDLQTLYTLGQCTQDLSSDDCKACLSDIIGNAIPWSYLGSVGGRVLYPSCNMRFELFQFYKEIDQGIISHSPKEKRRNLPRTITLIVVLPIVSVILFFVGCYLPKRKARKSFRAILRENFGHEGATLEPLQFDWDVIEAATNHFSNKNFIGKGGFGEVYKGILLDGRQIAVKRLSRTSTQGVNEFKNEVLLIAKLQHRNLVTFIGFCLEEEEKILIYEYVPNKSLDHFLFDFQRTKFLSWFERYNIIRGIAQGIIYLHEHSRLKVIHRDLKPSNILLDENMIPKISDFGLARIVELNQDKGNTNRIVGTLGYISPEYAMLGQFSEKSDVYSFGVMILEIITGKKNIRSYESHVGDSLLSNVWRQWSDQITLSILDQNIKGTYSEYEVIKCIQIGLLCVQQFPDDRPTMVTIVSYLNNDFNELPTPQKPAFLFHGQMDTKGIPQDSSSSQSINTCTPLTFNDLSITEFLPR* 898
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0846 897 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 499 887 - -
Mtr8g0846 897 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 17 250 - -
Mtr8g0846 897 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 260 491 - -
Mtr8g0846 897 ProSiteProfiles Gnk2-homologous domain profile. 271 370 IPR002902 -
Mtr8g0846 897 ProSitePatterns Protein kinases ATP-binding region signature. 577 599 IPR017441 GO:0005524
Mtr8g0846 897 SUPERFAMILY Protein kinase-like (PK-like) 554 876 IPR011009 -
Mtr8g0846 897 ProSitePatterns Serine/Threonine protein kinases active-site signature. 692 704 IPR008271 GO:0004672|GO:0006468
Mtr8g0846 897 ProSiteProfiles Gnk2-homologous domain profile. 380 486 IPR002902 -
Mtr8g0846 897 CDD STKc_IRAK 577 844 - -
Mtr8g0846 897 Pfam Protein kinase domain 572 839 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g0846 897 ProSiteProfiles Gnk2-homologous domain profile. 136 241 IPR002902 -
Mtr8g0846 897 SMART serkin_6 571 842 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g0846 897 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 499 887 - -
Mtr8g0846 897 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 260 491 - -
Mtr8g0846 897 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 17 250 - -
Mtr8g0846 897 Gene3D - 135 241 IPR038408 -
Mtr8g0846 897 Gene3D - 29 132 IPR038408 -
Mtr8g0846 897 Gene3D - 270 370 IPR038408 -
Mtr8g0846 897 Gene3D - 377 486 IPR038408 -
Mtr8g0846 897 ProSiteProfiles Protein kinase domain profile. 571 847 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g0846 897 Pfam Salt stress response/antifungal 149 238 IPR002902 -
Mtr8g0846 897 Pfam Salt stress response/antifungal 397 482 IPR002902 -
Mtr8g0846 897 Pfam Salt stress response/antifungal 276 366 IPR002902 -
Mtr8g0846 897 Pfam Salt stress response/antifungal 36 131 IPR002902 -
Mtr8g0846 897 ProSiteProfiles Gnk2-homologous domain profile. 29 134 IPR002902 -
Mtr8g0846 897 Gene3D Phosphorylase Kinase; domain 1 537 646 - -
Mtr8g0846 897 Gene3D Transferase(Phosphotransferase) domain 1 647 851 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0846 Mtr-Chr8 10456491 10460048 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g0846 243 897 Receptor kinase-like Gene Family AT4G05200 41.703 9.08e-173 516
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mtr8g0846 Pkinase 1.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0846 - - gmx:100806048 1205.28