Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0845 ATGGACACTCAATCACAACAACATCATAAAAAAGATTTCGTTGAATTAGAAGGAGAACAAAACCGGCTGCTACAATCCGAAGAATGCGAGAATATACCATTGTCAACACCGTCGTCCTCTTTGTCAACATCTTTGGACGATGGAAACAAAGAGGACTATGTGTATGCGGCGAAGGACAAGGTTCATATTTTTGACTTAGAGTCAAATGGCAACACCACCGGGTCAACGATTGTACCACCATTTTCATGGAAGAAGCTCTGGCTCTTCACGGGGCCAGGGCTTCTAATGAGTGTGGCATTTTTGGATCCAGGAAACATAGAAGGAGACTTGCAAGCCGGTGCGATTGCAGGGTACTCGTTGCTTTGGCTTTTAATGTGGTCCACCATAATGGGGCTCCTCATACAACTTTTATCGGCGAGGCTTGGTGTTGCCACGGGGCGCCACTTGGCGGAGCTTTGTAGGGAGGAATATTCCAATTGGGCTAGGCTACTTTTGTGGTTCTTAGCTGAGTTGGCTTTGATTGCTGCTGATATTCAAGAGGTTATTGGTAGTGCTATTGCTCTTAAGATTCTTAGCCATGGACTTCTTCCCATTTGGGCTGGTGTTATTATCACAGCCTTTGATTGTTTCTTCTTTCTATTTTTGGAGAATTATGGAGTTAGGAAGTTGGAAGGTGTTTTTGCTATTTTCATTGGAACTATGGGTCTTTCCTTTGCATGGATGTTCTTTGATACAAAGCCAAGTGAAGAAGAACTTCTTATGGGTCTTTTGATCCCAAGAGTTAGCTCAAAAACGCTTCGTCAAGCAGTGGAAATTGTAGGATGTGTTATAACTCCACATAATGTGTTTCTTCATTCAGCATTAGTACAATCAAGAGACATTGACATCCGTAACAAAGGCCAAGTTCAAGAGGCTCTAAATTACTACTCAATTGAGTCCTCAATAGCACTATTAATCACCTTAGTAATAAATCTATTTGTGATAACCGTTTTTGCTAGAGTATTCTATGATACTGAACAAGCCAAAGACATAGGATTAGTAAATGCAGGACAATATCTTGAAGAAAAATATGGTGGAGGGTTCTTTCCAATTCTTTATATTTGGGGTATTGGTTTATTAGCAGCTGGTCAAAGTAGCACAATTACTGGTACCTATGCTGGTCAATTTATAACTGAGGGATTTTTAAAATTGAATATAAAAAAATGGTTAAGGGCATTGATCACTAGAAGTTGTGCTATTGTTCCAACTATGATTGTAGCAATTGTTTTTAATACTTCAGAAGGTTCATTGGATACTTTGAATGAATGGCTTAATGTGCTTCAAGCAATACAAATTCCTTTTGCACTTATTCCTCTTCTTACTTTGGTGTCTAAAGAAGAGGTCATGGGGACATTCAGAATAGGGCCTATAGTAGAGAGGGTGGCATGGACAGTGGTGGTACTTGTGATAATGCTTTATGGATATATGTTATTAGATTTCTTCCTCTCAGAAGTGAAGGGACTATTGTTTGGATTTTTAGTCTTCCTTTGTGCAACAGCATGGATTTCATTTATTGCATTTCTTCTAAAACATAGTGGTGCTATTTCTTCTATCTTGGCCAGATCTCCAAATTCTGAAGGCTTTTCTCTTGCAGGAGATTAG 1641 0.3943 MDTQSQQHHKKDFVELEGEQNRLLQSEECENIPLSTPSSSLSTSLDDGNKEDYVYAAKDKVHIFDLESNGNTTGSTIVPPFSWKKLWLFTGPGLLMSVAFLDPGNIEGDLQAGAIAGYSLLWLLMWSTIMGLLIQLLSARLGVATGRHLAELCREEYSNWARLLLWFLAELALIAADIQEVIGSAIALKILSHGLLPIWAGVIITAFDCFFFLFLENYGVRKLEGVFAIFIGTMGLSFAWMFFDTKPSEEELLMGLLIPRVSSKTLRQAVEIVGCVITPHNVFLHSALVQSRDIDIRNKGQVQEALNYYSIESSIALLITLVINLFVITVFARVFYDTEQAKDIGLVNAGQYLEEKYGGGFFPILYIWGIGLLAAGQSSTITGTYAGQFITEGFLKLNIKKWLRALITRSCAIVPTMIVAIVFNTSEGSLDTLNEWLNVLQAIQIPFALIPLLTLVSKEEVMGTFRIGPIVERVAWTVVVLVIMLYGYMLLDFFLSEVKGLLFGFLVFLCATAWISFIAFLLKHSGAISSILARSPNSEGFSLAGD* 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0845 546 Pfam Natural resistance-associated macrophage protein 106 468 IPR001046 GO:0016020|GO:0030001|GO:0046873
Mtr8g0845 546 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 42 546 IPR001046 GO:0016020|GO:0030001|GO:0046873
Mtr8g0845 546 Hamap Divalent metal cation transporter MntH [mntH]. 72 494 IPR001046 GO:0016020|GO:0030001|GO:0046873
Mtr8g0845 546 PANTHER METAL TRANSPORTER NRAMP3 PROTEIN 42 546 - -
Mtr8g0845 546 PRINTS Natural resistance-associated macrophage protein signature 165 191 IPR001046 GO:0016020|GO:0030001|GO:0046873
Mtr8g0845 546 PRINTS Natural resistance-associated macrophage protein signature 195 214 IPR001046 GO:0016020|GO:0030001|GO:0046873
Mtr8g0845 546 PRINTS Natural resistance-associated macrophage protein signature 220 241 IPR001046 GO:0016020|GO:0030001|GO:0046873
Mtr8g0845 546 PRINTS Natural resistance-associated macrophage protein signature 269 292 IPR001046 GO:0016020|GO:0030001|GO:0046873
Mtr8g0845 546 PRINTS Natural resistance-associated macrophage protein signature 376 395 IPR001046 GO:0016020|GO:0030001|GO:0046873
Mtr8g0845 546 PRINTS Natural resistance-associated macrophage protein signature 404 421 IPR001046 GO:0016020|GO:0030001|GO:0046873
Mtr8g0845 546 PRINTS Natural resistance-associated macrophage protein signature 438 457 IPR001046 GO:0016020|GO:0030001|GO:0046873
Mtr8g0845 546 TIGRFAM nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 84 462 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0845 Mtr-Chr8 10443559 10445973 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g0845 49 525 Inorganic Solute Cotransporters AT1G47240 73.166 0.0 732
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0845 K21398 - gmx:100801411 905.59