Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0826 ATGAAAGAGAGCATTAAGTGTGAAGAAATTGGTCTCATTGGTGAACTAATCCAAGGTGAAGAGCTAGCAAAGAAGCTTTATGACCAAATTTTCTCTCCATCATCACCATCATCATCAACATCATCATCATCATCATCATCAACATCAACTTCATCACATCAAGTCTTAATTGACAAATTAATTTTGTCCATTGAGACAGCAATAACCATGGCAAAGGGTAATGAGGGAAAAATTAAGACAAACAATGTCAACATGATGGATTCTCATTGTTCAAATGGAAGCCCTAAAAGTGAGGTCCAAGACTCAAAGTTCAAGCACAAACATGTGTCTAAGAAAAGAAAAACCGTGCCTAAGTGGACAGAGCAAGTGAAGGTTTATTCTGGAACAGCAGCTGAAGGGTCTGTGGAGGATGGTCATAGCTGGAGAAAGTATGGACAAAAGGATATTCTTGGAGCTAAGTTTCCAAGAGGATACTACAGATGCACACATAGACATGCACAAGGTTGTCTAGCTACTAAGCAAGTGCAAAAATCAGATGAAGATGAAATGATATGTGAGATAACCTACAAAGGAAGACACACATGTACTCAATCTAACAAGGCACTCCCATCAAAAACAAAGTTGAAATTTGGACAAAATAAATCACAACTCAATCAAAAAATTCAACCCCAAGAAGAGAAAATACAATCACCTCTAGAAAATAATTTCTCTATTGACGACAAGGAGGATATATTTCAATCATTCAATTTTTCCTCTCCATCAATAGGATCTGAAAATGAAGATAACAACATATTTTTAGAGACCATGATTGAAAACAATTTCATGGAAAATGAGGATAACAATATATTCTCAGATTCAAACATTTTCTGCTTGTCATCACTATTGGATTTGGACAGCACTGGACTAGGCCCAAGCGAGAGTAACATCACTGAGATAATTTCAGGCCCAAATTCTATTGCCAATTCCCCAATGGATTTTGATCTCTATAATGACATAAATTTCGACATGGATGATTTCTCTATCAACACACAAGAACTTTGCTATTGA 1047 0.362 MKESIKCEEIGLIGELIQGEELAKKLYDQIFSPSSPSSSTSSSSSSSTSTSSHQVLIDKLILSIETAITMAKGNEGKIKTNNVNMMDSHCSNGSPKSEVQDSKFKHKHVSKKRKTVPKWTEQVKVYSGTAAEGSVEDGHSWRKYGQKDILGAKFPRGYYRCTHRHAQGCLATKQVQKSDEDEMICEITYKGRHTCTQSNKALPSKTKLKFGQNKSQLNQKIQPQEEKIQSPLENNFSIDDKEDIFQSFNFSSPSIGSENEDNNIFLETMIENNFMENEDNNIFSDSNIFCLSSLLDLDSTGLGPSESNITEIISGPNSIANSPMDFDLYNDINFDMDDFSINTQELCY* 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0826 348 ProSiteProfiles WRKY domain profile. 130 193 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mtr8g0826 348 SUPERFAMILY WRKY DNA-binding domain 134 197 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mtr8g0826 348 Pfam WRKY DNA -binding domain 136 195 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mtr8g0826 348 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 1 346 IPR044810 GO:0003700
Mtr8g0826 348 Gene3D WRKY domain 120 198 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mtr8g0826 348 SMART WRKY_cls 135 197 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mtr8g0826 348 MobiDBLite consensus disorder prediction 90 113 - -
Mtr8g0826 348 PANTHER WRKY TRANSCRIPTION FACTOR 46-RELATED 1 346 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0826 Mtr-Chr8 10234530 10237739 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g0826 2 253 WRKY Transcription Factor Family AT4G23810 36.620 4.00e-42 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mtr8g0826 WRKY 6.2e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0826 - - aprc:113849885 372.859
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g0826 8 10234530 10237739 Mtr8g0826 8 10234530 10237739 ECH
Mtr8g0826 8 10234530 10237739 Mtr7g3863 7 55450509 55452535 ECH
Mtr8g3539 8 45984819 45986665 Mtr8g0826 8 10234530 10237739 ECH
Mtr7g3863 7 55450509 55452535 Mtr8g0826 8 10234530 10237739 PCT