Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0812 ATGACTACAAATGAAAAGAAATTTGTGAGATTTGAAGATTGGAAGTCAGAATCATCATCTTTTAATTTTTCACAATATGATTCTTCAATTGATGGATTTGAAAAAAGAAAATCTAAACCAAGTGTTACTCCAGAAAAAAATAATGAATCATTGGAAAAACCAGCTTCTAGGTGTAGTGTTCTTGATCCACAAGGTCCACTACTTCAGAAATGGAACAAGATCTTTGTTATAACATGTGTGATGGCAGTATCTATGGATCCATTATTCTTTTACATCCCTGTGATTGATGACCAGAGAAAATGCCTTAATTTGAATGGAACATTGAAGATTACTGCTAGTGTTCTTCGGACGTTTTTCGATCTTTTCTACATTATTCGCATCGTCTTTCAGTTTCGAACCGGGTTTATTGCACCTTCTTCGCGCATTTTTGGAAGGGGAGAGCCGGTTGATGATCCTTTTGCTATAGCAATGAGATACTTAAGTTCTCACTTCATCATTGACATTCTATCAATTCTTCCACTTCCTCAGATGGTGATTTTAGCTATGATTCCAATTCCACAAGGCTCAGTTCCATATATAACAAAGGATTGGTTGAAGTATACGATAATAACACAATACGCGCCAAGACTTATGCGAATCTATACGTTGTTCAATGAAGTAACAAGCACTTCTGGTATATTAACTGAGACAGCATGGGCTGGAGCTGCTTATAATCTCTTTCTTTATATGCTAGCAAGTCATGTTGTTGGAGCATTTTGGTATTTGTTTTCAATAGAATCAGAGTTGCGGTGTTGGCGCAGACGGTTGAAGAATACTCCGTTCTTTGATGATTCCTATCTGAGCTGTGGACGAGTCAATTCGACACTTTTTTCAATTCTCAACAATTCTGCTACTTGTCCTTACAAAGATCCTGATGATATCATTGACCCAACAGTTTTCAATTTTGGAATATTTATGGATGCTCTAACGTCTCGTGTGGTGGAGTTGAATACAAACTTTCATCATAAATTCTTCTACTGCTTTTGGTGGGGTTTGCGCAATTTGAGTTCTGTTGGGCAGAACCTGAAGACAAGCACTTATATTGGGGAGATAATCTTTGCCATATTCATCGCTGTCTTTGGATTGGTTCTATTTGCATTACTTATAGGAAACATGCAGAAATATCTACAATCTACAACTGTTAGAGTTGAAGAGATGAGAATCAAGAGGAGGGATGCAGAACAATGGATGTGCCACCGTATGCTACCAGATCACATGAAGCAAAGAATTCGACGGTATGAACAATACAAATGGCAAGAAAATCGAGGCGTTGAAGAAGAGAAACTAATTTGCAACCTCCCTAAAGATCTGAGAAGAGACATAAGGAGACATCTTTGCTTAGATTTACTTAAAAAAGTGCCAATTTTCAGCAACATGGATAAACAGTTGTTGGATGCAATGTGTGATAAACTGAAGCCGGTCCTTTATACCGAGAAAAGTTTCGTTGTTCGTGAAGGTGATCCAGTGGACGAAATGCTCTTCATCATGCGCGGAAAACTTAAGACTGCCACGACAAATGGTGGAAGAACTGGTTTCTTTAACTCGACCGAACTCAAGGCTGGTGATTTTTGTGGAGAGGAGCTTCTAACATGGGCCTTGGATCCTACAACCTCTTCAAACTTACCTATTTCAACTAGTACAGTTGAAACTATTACGGAAGTTGAAGCTTTTGCTCTAATGCATGATGACTTGAAGATTGTTGCTTCCCAATTTCGACGTCTTATTAACAGAAAACAACTCCAACACACTTTCAGGTTTTATTCCTTGCAATGGAGGACATGGGGAGCGCGGTTCATACAAGTAGTATGGCGTCGATACAGGGAAAAAAGGGCTCAGAAATTGTTACGTGAATCGGAAAAAAGACAGGAAAATGCTTCTGAAAATGAGGAAGAGTCTTCTTCACCAAGCATTGGTTCCACTATATATGTACAAAGGTTTGCATCAAATGCATTAAAGCACTTAAGAAGTGGCAAAAGAGTGACACAGACAAAGAAATTTCTACCACTTTTGCCTAGGAAACCAGCTGAACCAGATTTCATCACTGGAAAAAACTAA 2094 0.3844 MTTNEKKFVRFEDWKSESSSFNFSQYDSSIDGFEKRKSKPSVTPEKNNESLEKPASRCSVLDPQGPLLQKWNKIFVITCVMAVSMDPLFFYIPVIDDQRKCLNLNGTLKITASVLRTFFDLFYIIRIVFQFRTGFIAPSSRIFGRGEPVDDPFAIAMRYLSSHFIIDILSILPLPQMVILAMIPIPQGSVPYITKDWLKYTIITQYAPRLMRIYTLFNEVTSTSGILTETAWAGAAYNLFLYMLASHVVGAFWYLFSIESELRCWRRRLKNTPFFDDSYLSCGRVNSTLFSILNNSATCPYKDPDDIIDPTVFNFGIFMDALTSRVVELNTNFHHKFFYCFWWGLRNLSSVGQNLKTSTYIGEIIFAIFIAVFGLVLFALLIGNMQKYLQSTTVRVEEMRIKRRDAEQWMCHRMLPDHMKQRIRRYEQYKWQENRGVEEEKLICNLPKDLRRDIRRHLCLDLLKKVPIFSNMDKQLLDAMCDKLKPVLYTEKSFVVREGDPVDEMLFIMRGKLKTATTNGGRTGFFNSTELKAGDFCGEELLTWALDPTTSSNLPISTSTVETITEVEAFALMHDDLKIVASQFRRLINRKQLQHTFRFYSLQWRTWGARFIQVVWRRYREKRAQKLLRESEKRQENASENEEESSSPSIGSTIYVQRFASNALKHLRSGKRVTQTKKFLPLLPRKPAEPDFITGKN* 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0812 697 Coils Coil 621 644 - -
Mtr8g0812 697 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL-LIKE PROTEIN 7 695 - -
Mtr8g0812 697 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 7 695 - -
Mtr8g0812 697 MobiDBLite consensus disorder prediction 31 57 - -
Mtr8g0812 697 Pfam Ion transport protein 71 396 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Mtr8g0812 697 Gene3D Jelly Rolls 466 586 IPR014710 -
Mtr8g0812 697 CDD CAP_ED 468 600 IPR000595 -
Mtr8g0812 697 MobiDBLite consensus disorder prediction 678 697 - -
Mtr8g0812 697 Pfam Cyclic nucleotide-binding domain 489 578 IPR000595 -
Mtr8g0812 697 SMART cnmp_10 468 599 IPR000595 -
Mtr8g0812 697 SUPERFAMILY cAMP-binding domain-like 397 586 IPR018490 -
Mtr8g0812 697 SUPERFAMILY Voltage-gated potassium channels 62 390 - -
Mtr8g0812 697 MobiDBLite consensus disorder prediction 629 649 - -
Mtr8g0812 697 Gene3D Helix hairpin bin 395 459 - -
Mtr8g0812 697 ProSiteProfiles cAMP/cGMP binding motif profile. 468 552 IPR000595 -
Mtr8g0812 697 Gene3D - 73 392 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0812 Mtr-Chr8 10094068 10099119 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g0812 9 692 Ion Channels AT4G01010 61.560 0.0 868
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0812 K05391 - gmx:100795201 1018.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g0812 8 10094068 10099119 Mtr8g0812 8 10094068 10099119 ECH
Mtr7g3867 7 55503255 55507416 Mtr8g0812 8 10094068 10099119 PCT