Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0810 ATGGACATCTTGAAGGTCCTTTTTTACTTAATCTTTCCTGTTGTATACGCCTTAAACGATTGCCCTTTTTCTTTGTGTGGCAACAATAGTTTCCTAATTCGTTTCCCCTTTCAATTAGGTGAGCAATATCCTTATTGTGTCTATCCTGGTTTCAACTTAAGTTGTACCAATGATAGCAAAACAATTCTAAAACTTCCTTACTCTGAAGAATTCTACGTACGCAGCATAAACTATCTCACACAACAGATACAACTCTACGATCCCGATGATTGTCTTCCAAAACGTCTTCTAAGACTCAATTTTTCAAATTCTCCTTTCATTGCTTCTTTTAGTCGTGACTACACATTCTTAGGCTGTTCATCTCAGAATATTGGGTCACAATTCATTCCCATTGATTGTCTTAGTAATTCAACATATTTTGTATCAGCCATTCGTTCAGTTAGCTTTGTCAATTCTCTATCTGGTTGCTCTGTTATAAAAAATCTTTCAGTTCCAATTGCAAGACCAGAACGGTTTCAAGAAAATCTCAGAGATGACCTTAGTGCAGATCTTCAATTAACATGGGATAAACCTGACTGCAGTTATTGTGAATCACATCAGCTAATGTGTGGATTTGAAAGCATTAACAGCAATCAAGTTGTATGTTTCTCTGATTACCAACCAGGTACATCGCGGCAAGGACTTAAAATTTTCAGAATCATAGCATTATGCGTTACTGGACCAGCTCTAATCTTTGTTATTCTAATGGCAAGTTGTGTGTGCTACAATGATAGAATAGGCAACATTAGCAGAAGTGCTGCTTCTCGGTCAGCACCAGCGGCAATATCACCGCAACCTGAAGCCACGGTAATTGCAGGTTTAGATGAATCCACAATTGAATCTTATGAGAAAGTAATTATTGGGGAGAGTCGACGTGTTCCTGGACCGAACGATGGATGTTGTTGGATATGCTTGGCAGAATACAACAGTAAAGAGACAGTAAGATGCATTCCTGAATGCAAACATTGTTTCCATGCTGATTGTATTGATGAGTGGCTTCGTATGAATGTTACATGCCCTGTTTGTCGTAACTCTCCTGCTCCTTCTCCTCTTAATGTTGCCTCCAGTAATGTTTGA 1116 0.3862 MDILKVLFYLIFPVVYALNDCPFSLCGNNSFLIRFPFQLGEQYPYCVYPGFNLSCTNDSKTILKLPYSEEFYVRSINYLTQQIQLYDPDDCLPKRLLRLNFSNSPFIASFSRDYTFLGCSSQNIGSQFIPIDCLSNSTYFVSAIRSVSFVNSLSGCSVIKNLSVPIARPERFQENLRDDLSADLQLTWDKPDCSYCESHQLMCGFESINSNQVVCFSDYQPGTSRQGLKIFRIIALCVTGPALIFVILMASCVCYNDRIGNISRSAASRSAPAAISPQPEATVIAGLDESTIESYEKVIIGESRRVPGPNDGCCWICLAEYNSKETVRCIPECKHCFHADCIDEWLRMNVTCPVCRNSPAPSPLNVASSNV* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0810 371 Pfam Wall-associated receptor kinase C-terminal 150 217 IPR032872 -
Mtr8g0810 371 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 278 361 IPR013083 -
Mtr8g0810 371 Pfam Wall-associated receptor kinase galacturonan-binding 21 87 IPR025287 GO:0030247
Mtr8g0810 371 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 5 365 - -
Mtr8g0810 371 SMART ring_2 314 355 IPR001841 -
Mtr8g0810 371 PANTHER RING-H2 FINGER PROTEIN ATL21A-RELATED 5 365 - -
Mtr8g0810 371 SUPERFAMILY RING/U-box 307 359 - -
Mtr8g0810 371 Pfam Ring finger domain 314 356 IPR001841 -
Mtr8g0810 371 ProSiteProfiles Zinc finger RING-type profile. 314 356 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0810 Mtr-Chr8 10084131 10087882 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g0810 26 361 C3H Transcription Factor Family AT2G25410 43.402 3.60e-90 274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0810 - - aprc:113851081 546.199
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g0810 8 10084131 10087882 Mtr8g0810 8 10084131 10087882 ECH
Mtr7g3869 7 55514363 55519985 Mtr8g0810 8 10084131 10087882 PCT