Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0797 ATGATTGGATTCCTTAATTGCAGTAGTGGATACAATGGATTGGTAGATTTTGATTTTCAGAAGCTTCTTTCGAAGGCACCCAGTTTTACGATTGATGAACTTATTCAATCTGATGCTGTTCCTCGTCTTGTTGAATTTCTAGTTATTGACGATTTTCCTCAACGCCAGTTTTTTGCTGCTTGGATACTCGCATACATAGCAGGTGGAACTTCTGAGAACACTAAGGTTGTAATTGATCATGGGGCTGTACCATTACTAGTCAACCTACTCAGTTCACCTAGTGTTGCTGTTCGTCACGAGGCTTCGTGGGCGTTGGGAAACGTTGCCTGTGATTCCCCTAGTTGCCGTTATCTTGTTCTCAGTCATGGTGCCATGATCCCGCTGTTATCCCACTTGAATGAGCTAGCAGATATTTCTATGCTGAGAATTGCAACGCGAACCCTGTCAAACTTTTGTAGGGGCAAACCGCAACCCCTGTTTGAGCAGTTGAGGCCAGCACTTCCCACTCTCGAGCTTTTGATTTTTTCCAATGATGAAGAAGTCCTGGCAGATGCATGCTGGGCACTCTCATATCTTTCTGATGGAACAAATGACAAAATCCAAGCGGTGATCGAGGCAGGTGTATGTGGCAGACTGGTGGAGCTCCTTTTGAACCCTTCTCCTTCAGTGGTGATTCCTGCACTTCGCACATTGGGAAATATTGTTGGCGGAGACGACATGCAAACTCAGGCTATTCTCGATCATGGTTCACTCCCATGCCTTTTGAGCCTGTTGACCCATAATCACGAGGAAACTATTAGGAAAGAAGCTTGCTGGACTATATCAAACATTACAGCTGGAAACAGAGAGCAGATACAGGCTGTTATTGAAGCTGGTCTGATTGCCCCTCTGGTCAATCTTCTTCAAAATGCGGAGTTTGACACTTTAAAGGAAGCAGCATGGGCACTCTCTAATGCTACATCTGGCAGTACCCATGAGCAAATCGATTATTTGGCGAGCCAGGGTTGCATTAAGCCTCTGTGTGATTTGCTTGTTTGCTCTGATCCAAAAATTGTTACTGTCTGTTTACAATGTCTTGAGGATTTTCTGAAGGTTGGAGAAGCGGGGAAAAACCCCGGTTACACAGGAGATGTCAACTTGTATGCTCTGATGATAGAGGACGCTGAGGGATTGGAAAAGATTGAAAACTTGCAGAGTCATGACAACTATGAAATTTATGGGAAGGCTGTCAAAATTCTTGAGACATATTGGTTGGAAGATGAAGGTGAGACGCCATCTCCAGGCAATGGTTCTCAACCTGGTTTTAACTTTAGAGGCAGTGACCTTCCTGTCCCATCTGGTGGATTCAATTTCAGCAGAATGTGA 1365 0.4462 MIGFLNCSSGYNGLVDFDFQKLLSKAPSFTIDELIQSDAVPRLVEFLVIDDFPQRQFFAAWILAYIAGGTSENTKVVIDHGAVPLLVNLLSSPSVAVRHEASWALGNVACDSPSCRYLVLSHGAMIPLLSHLNELADISMLRIATRTLSNFCRGKPQPLFEQLRPALPTLELLIFSNDEEVLADACWALSYLSDGTNDKIQAVIEAGVCGRLVELLLNPSPSVVIPALRTLGNIVGGDDMQTQAILDHGSLPCLLSLLTHNHEETIRKEACWTISNITAGNREQIQAVIEAGLIAPLVNLLQNAEFDTLKEAAWALSNATSGSTHEQIDYLASQGCIKPLCDLLVCSDPKIVTVCLQCLEDFLKVGEAGKNPGYTGDVNLYALMIEDAEGLEKIENLQSHDNYEIYGKAVKILETYWLEDEGETPSPGNGSQPGFNFRGSDLPVPSGGFNFSRM* 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0797 454 PIRSF Importin_alpha 13 451 IPR024931 GO:0005737|GO:0006606|GO:0061608
Mtr8g0797 454 SUPERFAMILY ARM repeat 19 422 IPR016024 -
Mtr8g0797 454 PANTHER IMPORTIN SUBUNIT ALPHA 18 443 - -
Mtr8g0797 454 Pfam Armadillo/beta-catenin-like repeat 325 359 IPR000225 GO:0005515
Mtr8g0797 454 Pfam Armadillo/beta-catenin-like repeat 239 279 IPR000225 GO:0005515
Mtr8g0797 454 Pfam Armadillo/beta-catenin-like repeat 281 320 IPR000225 GO:0005515
Mtr8g0797 454 Pfam Armadillo/beta-catenin-like repeat 197 235 IPR000225 GO:0005515
Mtr8g0797 454 Pfam Armadillo/beta-catenin-like repeat 166 193 IPR000225 GO:0005515
Mtr8g0797 454 Pfam Armadillo/beta-catenin-like repeat 70 109 IPR000225 GO:0005515
Mtr8g0797 454 Pfam Atypical Arm repeat 379 423 IPR032413 -
Mtr8g0797 454 Gene3D - 18 418 IPR011989 -
Mtr8g0797 454 PANTHER IMPORTIN ALPHA 18 443 - -
Mtr8g0797 454 SMART arm_5 238 279 IPR000225 GO:0005515
Mtr8g0797 454 SMART arm_5 27 68 IPR000225 GO:0005515
Mtr8g0797 454 SMART arm_5 112 153 IPR000225 GO:0005515
Mtr8g0797 454 SMART arm_5 324 364 IPR000225 GO:0005515
Mtr8g0797 454 SMART arm_5 155 194 IPR000225 GO:0005515
Mtr8g0797 454 SMART arm_5 70 110 IPR000225 GO:0005515
Mtr8g0797 454 SMART arm_5 281 321 IPR000225 GO:0005515
Mtr8g0797 454 SMART arm_5 196 236 IPR000225 GO:0005515
Mtr8g0797 454 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 292 320 IPR000225 GO:0005515
Mtr8g0797 454 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 249 292 IPR000225 GO:0005515
Mtr8g0797 454 MobiDBLite consensus disorder prediction 421 454 - -
Mtr8g0797 454 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 81 123 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0797 Mtr-Chr8 9890001 9893157 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g0797 53 334 U-box Gene Family AT3G46510 25.442 2.99e-08 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0797 K15042 - gmx:100808498 674.47