Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0796 ATGGCAGAGCAAATTCCATATGGTGTTGCTACTAGCCTCATAAATAGGTTAGGGTCTGCTGCCTTGCGTGAATTTGGACGGATCAATGGTGTTATGAATGAATTGGAAAAGCTTAAGAACACGGTTGAATCTATTAGAGTTGTGCTCCTTGATGCTGAAGAGAAACAAGAAGCACAAAATCATGCTGTTCGAAATTGGGTAAGAAGGCTCAAAGATGTGCTTCATCCTGCAGATGATTTGCTAGATGAATTTGTTATTGAAGATATGAGGAACAAAATGGATGAAACTCATAAGAACAAAGTAACAAAGGTACTTCATTCCTTATCTCCAAACAAAATTTCTTTTCGCCGTAAAATGGCATATGAGATTGAAAAAATACAAAAAGGTTTTAATGATGTAGTAAAAGATATGTCTGGGTTGAATCTAAACTCAAACGTTGTGGTGGTTCAACAAACTAACTGTGTAAGGAGAGAGACTAGTTCTTTTGTGTTGGAATCGGATATCATTGGAAGAGAAGATGATAAAATGAAGATTATAAGCTTGTTGAGACAACCACATGAAAATCAAAATGTCTCTTTGATTGCTGTTGTTGGATTTGGTGGTTTGGGAAAGACAACTCTTGCTCAAATGATTTATTGTGACATGGAAGTGAAAAATTTGTTTGAAAAGAGGATGTGGGTATGTGTCTCTGAAAACTTTGAAGTCAAAACTATTGTGAAGAACATGTTGGAGTCATTAACCAAGAACAAAATTGATGATGCATTATCATTGGACAACTTGCAAACTAAGCTTCGTGACCATTTAACTGGTAAGAGATACTTGTTAGTTCTAGATGACATTTGGAATGAGAGTTATGAAAAATGGGCTCAATTGAAGACTTATTTGATGTGTGGGGCTCAAGGAAGTAAGGTTGTAGTGACGACTCGTAGTGCAATTGTGGCACAAACCATGGGTGTAAGTGTCCCTTATGTTTTGAATGGTTTGATTCCAGAAGAATCTTGGAGTCTATTAAAGAAAATTGCATCTTGGGATGATACCATTGGAGTGAATAGAACCATTGAATCAATTGGTAGGAAGATAGCGGAAAAGTGCAAAGGAGTTCCATTAGCAATTAGATCGTTAGGAGGCATATTACAAAGTAAAAGTGAAGAAAGGGAATTGATTGATGTCCTACAAGGAAATTTTTGGAACTTGTGTGAGGATAAAGATAGCATCATGCCGGTCCTAAAATTGAGTTACCATAACTTGTCGCCTCAACAAAGACAATGTTTTGCTTATTGCTCTTTATATCCTAAGGATTGGGAATTTGAGAAGGATGAGTTGATTCGAATGTGGATGGCGCATGGTTATCTTGACTGTTCAGTTGAAGGGAAGAGCATGGAAGATGTTGGTAACCAATTTGTTAATATTTTCTTGATGAAATCATTCTTCCAAGATGCAAAATTGAATAAAGATGGTGATATAAATGGTTTTAGAATGCATGATTTGATGCACGATCTTGCAACACAAGTAGCTGGAAACGATTGTTGTTACTTGGATAGTACGGCAAAAAGATGTCCAGGAAGACCTGTGCATGTATCTCTGGAATTTGAAGCGTTTTGTTTGTTGGAATCAATGGATGTTAGTCGACTTCGAACTTTGATTATGTTGGGAACCCATTACAACACATTGGATAGAGAGGAACTATCAGTTATTTCAAATTTCAAAAACTTACGCGTCTTGAAGCTAAGTTCTTCTTTGAGCAAGCTACCTTGTTCCATTGACAAATTGAAGCATTTAAGATATCTGAATTTATTAAGGTGTCGTGGACTAGAAAGTCTTCCCAAATTTTTAGGCAATCTAGTTTGTTTACAGACCATAAAAGTTTCATGGGATGAAGTTGTACTTTCTACAAAAGTTGTCTCAAAATTAATCAATTTGAGGCACCTTGAGATTAATAATTGGACCTTCAAAGAAAAGACACAAGATGGATTTCGAAAATTGAGCATACAACAATATGATGGTTCGATGTTTTCCAAATGGCTTTCTCCACTCACAAATATAATTGAAATATCTCTTGATTGTTGTCGAGGTTTACAATATCTCCCACCACTGGAACGTCTTCCATTCCTTAAGTCACTTGAGTTATGTTACCTCGATGAATTGGAGTACATATATTACGAAGAGCCTATTCTTCATGAATCATTCTTCCCATCTTTGGAGAGTCTAAAATTTATGGGTTGTAATATTCTGAGAGGATGGAGGAGGATGGGAGATGATTTCAGCGATATTAATTCTTCACGTCATCTCTTGTTGCCTCAGTTTCCTCGTCTATCTATATTGGAAATTGGTGGGTGCTGGATGTTGACCTCCATGCCTATTTTTCCAGAGATTAAGACGAGACTATCATTGACAGAGTGCAATGTGCAGATATTGGAAGCAACACTAAATATAGCAATGTCACAATATTCGACTGGCTTCCCTCCTCTTTCCATGCTCAAATCCATGGAAATTGGCGAAGTCAGTTCGGATGTGAAAAAACTCCCAAAAGATTGGTTGCAAAATCTCACATCTCTTGAGAATCTTGATTTTTACTTTGTTTCAAGTGAACAGTTTCAAGTAATTGAAATGTGGTTTAAAGATGGCCTCAATTGCCTTCCTTCTCTCCAAACAATCACCTTTAAAAGTTGTTCTCACCTAAATACACTGCCATATTGGGTATGCAACCTATCATCACTTCAACATATCAAAATGATCAATTGTGGAAATTTGGCACTGCTTCCTGAAGGAATGTCACGCCTTACCAACTTACGTACCCTAGAAATCATTGGATGCCCACTCTTAGGTGAAGAGTTCTGGACAGAAACAAGTGCAACAACTAGTATCATTAGACAGGAAGTGTTTTGGCATGAGGAAGACAATGGGGAACCAAAACGACAATTCTTTTATGAGTCAGGCTACTCTGTACGTGAACGAAACAAACGATGGGCAAAGTTACAATTTAGAAAAATATAA 2994 0.3694 MAEQIPYGVATSLINRLGSAALREFGRINGVMNELEKLKNTVESIRVVLLDAEEKQEAQNHAVRNWVRRLKDVLHPADDLLDEFVIEDMRNKMDETHKNKVTKVLHSLSPNKISFRRKMAYEIEKIQKGFNDVVKDMSGLNLNSNVVVVQQTNCVRRETSSFVLESDIIGREDDKMKIISLLRQPHENQNVSLIAVVGFGGLGKTTLAQMIYCDMEVKNLFEKRMWVCVSENFEVKTIVKNMLESLTKNKIDDALSLDNLQTKLRDHLTGKRYLLVLDDIWNESYEKWAQLKTYLMCGAQGSKVVVTTRSAIVAQTMGVSVPYVLNGLIPEESWSLLKKIASWDDTIGVNRTIESIGRKIAEKCKGVPLAIRSLGGILQSKSEERELIDVLQGNFWNLCEDKDSIMPVLKLSYHNLSPQQRQCFAYCSLYPKDWEFEKDELIRMWMAHGYLDCSVEGKSMEDVGNQFVNIFLMKSFFQDAKLNKDGDINGFRMHDLMHDLATQVAGNDCCYLDSTAKRCPGRPVHVSLEFEAFCLLESMDVSRLRTLIMLGTHYNTLDREELSVISNFKNLRVLKLSSSLSKLPCSIDKLKHLRYLNLLRCRGLESLPKFLGNLVCLQTIKVSWDEVVLSTKVVSKLINLRHLEINNWTFKEKTQDGFRKLSIQQYDGSMFSKWLSPLTNIIEISLDCCRGLQYLPPLERLPFLKSLELCYLDELEYIYYEEPILHESFFPSLESLKFMGCNILRGWRRMGDDFSDINSSRHLLLPQFPRLSILEIGGCWMLTSMPIFPEIKTRLSLTECNVQILEATLNIAMSQYSTGFPPLSMLKSMEIGEVSSDVKKLPKDWLQNLTSLENLDFYFVSSEQFQVIEMWFKDGLNCLPSLQTITFKSCSHLNTLPYWVCNLSSLQHIKMINCGNLALLPEGMSRLTNLRTLEIIGCPLLGEEFWTETSATTSIIRQEVFWHEEDNGEPKRQFFYESGYSVRERNKRWAKLQFRKI* 998
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0796 997 Gene3D - 151 322 IPR027417 -
Mtr8g0796 997 Pfam Rx N-terminal domain 11 99 IPR041118 -
Mtr8g0796 997 Gene3D Ribonuclease Inhibitor 525 796 IPR032675 -
Mtr8g0796 997 Gene3D Ribonuclease Inhibitor 797 953 IPR032675 -
Mtr8g0796 997 PRINTS Disease resistance protein signature 193 208 - -
Mtr8g0796 997 PRINTS Disease resistance protein signature 267 281 - -
Mtr8g0796 997 PRINTS Disease resistance protein signature 364 378 - -
Mtr8g0796 997 PRINTS Disease resistance protein signature 588 604 - -
Mtr8g0796 997 PANTHER OS05G0414200 PROTEIN 34 645 - -
Mtr8g0796 997 PANTHER OS05G0414200 PROTEIN 633 939 - -
Mtr8g0796 997 SUPERFAMILY L domain-like 484 945 - -
Mtr8g0796 997 Coils Coil 35 55 - -
Mtr8g0796 997 Gene3D - 413 504 IPR036388 -
Mtr8g0796 997 PANTHER DISEASE RESISTANCE PROTEIN RP 633 939 IPR044974 GO:0006952
Mtr8g0796 997 PANTHER DISEASE RESISTANCE PROTEIN RP 34 645 IPR044974 GO:0006952
Mtr8g0796 997 Gene3D - 10 124 - -
Mtr8g0796 997 Pfam NB-ARC domain 172 415 IPR002182 GO:0043531
Mtr8g0796 997 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 155 427 IPR027417 -
Mtr8g0796 997 CDD RX-CC_like 7 128 IPR038005 -
Mtr8g0796 997 Gene3D - 328 412 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0796 Mtr-Chr8 9839161 9842738 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g0796 190 504 WRKY Transcription Factor Family AT5G45050 24.625 2.67e-08 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0796 - - mtr:MTR_8g027540 1957.18