Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0779 ATGGGAAGAGCTCCTTGTTGTGCCAAAGTTGGATTGCACAAGGGTCCATGGACTACTAAAGAAGATGCATTGCTTACAAAATATGTTCAAGCTCATGGTGAAGGCCAATGGAAATCACTTCCTAAAAAAGCTGGACTTCTTAGATGTGGGAAAAGTTGTAGACTTAGATGGATGAATTATCTTAGACCAGATATAAAGAGAGGTAACATAACTCAAGAAGAAGATGATCTCATAATAAGATTACATTCACTTCTTGGAAATAGATGGTCACTTATAGCCGGAAGATTACCAGGACGAACAGACAATGAAATAAAGAACTACTGGAACACACATCTTCTTAAAAAGATGCAAAGAAATCAACAAACATGTGATGTTACAACAGATCATGATGAACAAGAACAACCCAAGAAAAAGAACAACAACAAAAAGAAAAAGAGAAACAACAAAGAGAAGAAAAATGACAAGAAAAAAGGTACAAATAATGATGATAAAGAAGAAGAAGAAAAAATCCAAGTTTATTTACCAAAAGCTATTAGGATAAAAGCTTTAAATTTACCAAGAACGGATAGTGGTTCATTTACATATGAATCAAATTCATCAAATGGTAGCCAACAAAAAGAAGGAACACAACAAGTGACAAACAACAATAATAATAACAACAACGTTGTTTGTGAGGTTGGTGAGAAGGGAGAAAATGACGGATTTGGGCATGACTATGACTATGACTTAGTCAACGTTGAAAGGTTAGAGATGGAATGTGAGTCATATTTTGACACTTGTGGTGATCATGGAACATTAGATAGACTCTATGATGAATACTTGCAACTCTTGAACATGGATGTTTGCAATTACGAGTTTGATTCTTCTTTTGTTGAATCCTTCTTTGATTCAAACAATAATTAA 903 0.34 MGRAPCCAKVGLHKGPWTTKEDALLTKYVQAHGEGQWKSLPKKAGLLRCGKSCRLRWMNYLRPDIKRGNITQEEDDLIIRLHSLLGNRWSLIAGRLPGRTDNEIKNYWNTHLLKKMQRNQQTCDVTTDHDEQEQPKKKNNNKKKKRNNKEKKNDKKKGTNNDDKEEEEKIQVYLPKAIRIKALNLPRTDSGSFTYESNSSNGSQQKEGTQQVTNNNNNNNNVVCEVGEKGENDGFGHDYDYDLVNVERLEMECESYFDTCGDHGTLDRLYDEYLQLLNMDVCNYEFDSSFVESFFDSNNN* 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0779 300 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Mtr8g0779 300 Gene3D - 14 66 - -
Mtr8g0779 300 MobiDBLite consensus disorder prediction 153 167 - -
Mtr8g0779 300 CDD SANT 16 61 IPR001005 -
Mtr8g0779 300 MobiDBLite consensus disorder prediction 124 138 - -
Mtr8g0779 300 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Mtr8g0779 300 SMART sant 13 63 IPR001005 -
Mtr8g0779 300 SMART sant 66 114 IPR001005 -
Mtr8g0779 300 MobiDBLite consensus disorder prediction 189 219 - -
Mtr8g0779 300 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Mtr8g0779 300 PANTHER MYB TRANSCRIPTION FACTOR 1 286 - -
Mtr8g0779 300 MobiDBLite consensus disorder prediction 119 167 - -
Mtr8g0779 300 Gene3D - 71 112 - -
Mtr8g0779 300 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Mtr8g0779 300 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Mtr8g0779 300 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Mtr8g0779 300 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Mtr8g0779 300 CDD SANT 71 112 IPR001005 -
Mtr8g0779 300 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 1 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0779 Mtr-Chr8 9612208 9613702 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g0779 1 116 MYB Transcription Factor Family AT4G38620 75.000 9.61e-64 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mtr8g0779 Myb_DNA-binding 8.9e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0779 K09422 - gmx:100101857 332.798
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g0779 8 9612208 9613702 Mtr8g0779 8 9612208 9613702 ECH
Mtr7g3891 7 55719255 55720517 Mtr8g0779 8 9612208 9613702 PCT