Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0768 ATGTTATCTTACAAATTCATAATCCTTATTCCCCTCACACCCATCATTCTTTTCATAATTCGATACATATTATTCAAAACTGGTTTAATACACACAACAAAAAAACTCCACAAAAAACTACAAGATTTTTTTTATCTTTACCAATACCTCAAAGTCCCCGAACTAAACCAAACCATGCAACCGAACATGTTCTATCGTAAAGTTTCGCTTTATTTACATTCTCTTCCTTCTCTTGAAGATTCCGACTTCACCAATCTCATTACCGGAAATAATCAAAACGACATCGTTTTAACCCTAGACTCAGATCAAATCATCGAAGACAGGTTTCTCGGTGCTACGGTTTATTGGTTCTATACAAAAACCGAACCAAATCAAACCGGTGCATTTGTGATCAAGATCAGAAAAACCGATAAACGAAGAATATTAAGTAGTTATCTTCATCATATTACCACCATGTCCGCTGAAATAGAATACAACGGAAAACGTGATTTACGTTTGTTCGTTAATATCACCGGCGGTGGTGGTGGTGGAAGGAGGTGGAGGTCTGTTCCGTTTAATCATCCATCGACATTTGAAACGATGTTAATGGAAACTGATTTGAAGAACAGAATAAAAAACGATCTCGAATCGTTTTTGAAAGCGAAGAATTATTATCGGAGACTCGGTCGTGTTTGGAAACGGAGCTTCTTGTTATACGGTGAATCCGGTACCGGAAAATCTAGCTTTGTTGCAGCCATGGCGAATTTTCTTTGCTATGATGTATATGATGTTGATCTCTCGAAAATTCAAAGCGATTCAGATTTGAAATTTCTCTTACTAGAAACATCACCTAAATCGATTATCGTTGTTGAGGATCTCGATCGGTTTATCACGGCGGAATTGGAATCTCCGGCGACCGTTACGTCGGTGGGGATTCAGAATTTCATGGACGGGATTATGACTTCGAGTTATGCCGAAGGAAGAATAATGATTTTCACGATGAATAGTAAAGAGTTTATTGATCCGAATTTTCTCCGACCGGGGCGTGTCGACGTTCATATTCATTTTCCGGTGTGTGATTTTTCATCTTTCAAAGCTTTGGCGAATAGTTACTTAGGTGTGAAGGAACACAAGCTTTTTCCGGCGGTGGATGAGATTTTCCGGCAGGGAGCGAGTTTGAGTCCGGCGGAGATAGGTGAGTTGATGATTGCGAATCGGAACTCGCCGAGTCGGGCTATTAAATCGGTTATCGGGGCATTGCAAATGGACGGTGATGGGAGAGGGTGTGGGGATATGATCGTACGGCGGATAGAAGATGATGACGTGGAAGATGAAAGTAACCAAGGTGGTCTTTGTGGTGGTGATGGTTTTTCTACGGTTAAGGATTTGAAGAAGATTTATGGTTTGCTTAGATTAAGGAATGTTAAGAGGAATATGTCGGGTAATTTATTGGTCAACGATGAAGGAAGATAA 1452 0.4015 MLSYKFIILIPLTPIILFIIRYILFKTGLIHTTKKLHKKLQDFFYLYQYLKVPELNQTMQPNMFYRKVSLYLHSLPSLEDSDFTNLITGNNQNDIVLTLDSDQIIEDRFLGATVYWFYTKTEPNQTGAFVIKIRKTDKRRILSSYLHHITTMSAEIEYNGKRDLRLFVNITGGGGGGRRWRSVPFNHPSTFETMLMETDLKNRIKNDLESFLKAKNYYRRLGRVWKRSFLLYGESGTGKSSFVAAMANFLCYDVYDVDLSKIQSDSDLKFLLLETSPKSIIVVEDLDRFITAELESPATVTSVGIQNFMDGIMTSSYAEGRIMIFTMNSKEFIDPNFLRPGRVDVHIHFPVCDFSSFKALANSYLGVKEHKLFPAVDEIFRQGASLSPAEIGELMIANRNSPSRAIKSVIGALQMDGDGRGCGDMIVRRIEDDDVEDESNQGGLCGGDGFSTVKDLKKIYGLLRLRNVKRNMSGNLLVNDEGR* 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0768 483 ProSitePatterns Sigma-54 interaction domain ATP-binding region A signature. 229 242 IPR025662 -
Mtr8g0768 483 SMART AAA_5 225 353 IPR003593 -
Mtr8g0768 483 CDD AAA 226 350 - -
Mtr8g0768 483 Pfam Domain associated at C-terminal with AAA 34 118 IPR025753 -
Mtr8g0768 483 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 177 408 IPR027417 -
Mtr8g0768 483 Gene3D - 181 351 IPR027417 -
Mtr8g0768 483 Pfam ATPase family associated with various cellular activities (AAA) 230 350 IPR003959 GO:0005524|GO:0016887
Mtr8g0768 483 PANTHER BNAC04G00800D PROTEIN 7 435 - -
Mtr8g0768 483 PANTHER BCS1 AAA-TYPE ATPASE 7 435 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0768 Mtr-Chr8 9506666 9508750 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g0768 221 351 Calmodulin-binding Proteins AT3G56690 26.056 3.46e-06 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0768 - K08900 gmx:100787809 610.527
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g0768 8 9506666 9508750 Mtr8g0768 8 9506666 9508750 ECH
Mtr8g0768 8 9506666 9508750 Mtr7g3900 7 55773651 55775515 ECH
Mtr7g3900 7 55773651 55775515 Mtr8g0768 8 9506666 9508750 PCT