Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0761 ATGATGTTTGAATTAGAAAACATGGAATATAGCCAATATAGTAGTTATTCAGCAGAAGCAGGAGAAGAAGAAACATACACAACTAGTAGCATATCTTCCATGAGAAAGAAGAAAAACAAGAATACAAAGAGGTTTACTGATGAACAAATCAAATCATTGGAAACTATGTTTGAAACTGAGACAAGACTTGAACCAAGAAAGAAGTTGCAGTTAGCTAGAGAGCTTGGATTGCAGCCAAGACAAGTTGCTATATGGTTTCAAAACAAAAGAGCTAGATGGAAATCAAAGCAACTTGAAAGAGAATACAACAAACTTCAAAATAGTTACAATAATTTGGCTTCAAAGTTTGAATCTATGAAGAAGGAAAGACAAACATTACTAATACAGTTGCAGAAGCTGAATGATCTAATACAAAAGCCAATAGAGCAAAGTCAGAGTAGTTCACAAGTTAAAGAAGCAAAGAGCATGGAAAGTGCATCAGAAAATGGAGGAAGAAACAAATGTGAGGCTGAGGTGAAACCAAGTCCTTCAATGGAAAGATCAGAACATGTACTTGATGTTCTATCAGATGATGACACAAGCATAAAGGTTGAATACTTTGGTTTAGAAGATGAAACTGGTCTTATGAATTTTGCTGAACATGCTGATGGTTCTTTAACATCACCAGAAGATTGGAGTGCTTTTGAATCAAATGATTTATTAGGCCAATCAAGTTGTGATTATCAATGGTGGGACTTTTGGTCTTGA 747 0.3481 MMFELENMEYSQYSSYSAEAGEEETYTTSSISSMRKKKNKNTKRFTDEQIKSLETMFETETRLEPRKKLQLARELGLQPRQVAIWFQNKRARWKSKQLEREYNKLQNSYNNLASKFESMKKERQTLLIQLQKLNDLIQKPIEQSQSSSQVKEAKSMESASENGGRNKCEAEVKPSPSMERSEHVLDVLSDDDTSIKVEYFGLEDETGLMNFAEHADGSLTSPEDWSAFESNDLLGQSSCDYQWWDFWS* 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0761 248 CDD homeodomain 45 97 IPR001356 GO:0003677
Mtr8g0761 248 Gene3D - 31 105 - -
Mtr8g0761 248 SUPERFAMILY Homeodomain-like 26 98 IPR009057 -
Mtr8g0761 248 ProSiteProfiles 'Homeobox' domain profile. 36 96 IPR001356 GO:0003677
Mtr8g0761 248 SMART HOX_1 36 100 IPR001356 GO:0003677
Mtr8g0761 248 Pfam Homeobox associated leucine zipper 96 137 IPR003106 GO:0006355|GO:0043565
Mtr8g0761 248 MobiDBLite consensus disorder prediction 16 40 - -
Mtr8g0761 248 MobiDBLite consensus disorder prediction 16 35 - -
Mtr8g0761 248 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-7 17 248 - -
Mtr8g0761 248 MobiDBLite consensus disorder prediction 164 181 - -
Mtr8g0761 248 Coils Coil 88 136 - -
Mtr8g0761 248 MobiDBLite consensus disorder prediction 141 181 - -
Mtr8g0761 248 PRINTS Lambda-repressor HTH signature 67 76 IPR000047 GO:0003677
Mtr8g0761 248 PRINTS Lambda-repressor HTH signature 76 92 IPR000047 GO:0003677
Mtr8g0761 248 Pfam Homeodomain 43 94 IPR001356 GO:0003677
Mtr8g0761 248 MobiDBLite consensus disorder prediction 141 162 - -
Mtr8g0761 248 ProSitePatterns 'Homeobox' domain signature. 71 94 IPR017970 GO:0000981|GO:0006355
Mtr8g0761 248 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 17 248 IPR045224 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0761 Mtr-Chr8 9366033 9367521 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g0761 44 248 Homeobox Transcription Factor Family AT3G61890 54.286 1.02e-63 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Mtr8g0761 Homeodomain 2.3e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0761 K09338 - gmx:100811208 352.058
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g0761 8 9366033 9367521 Mtr8g0761 8 9366033 9367521 ECH