Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0758 ATGTCACCTTCTTCATCTTCCTCTATAATATCACTTCCTCATGAAAATGAAAACCCTTCACCACAAACCCTAACCCTTCAACAAAAACTTCAATTTCTAGTCCAAACCCAATCCGAAAATTGGGTCTATGCTATTTTATGGCAAACAACAAAAGATGAAAAAGGTAAACCTCTCTTATCTTGGGGTGAAGGCTATTTTCAAGGAACCAAAGAAACAACAAATTCAAACAAACAAAACGACAGTAACACGTGTGCAAACAAAGATGCTGAATGGTTCTATGTGATGTCGTTGACTCGGATTTTTTCCATAGGTAATGCTTCTTCAATTTCATTACCTGGTAAATCTTTTGCTTTAGATTCTGTTCTTTGGTTGAATAGTAAACATGAACTGCAAATCTATAACTGTGAAAGATCCAATGAAGCACACGTGCATGGAATTGAAACATTGATTTGTATTCCGACAACTAACGGTGTAATCGAAATGGGTTCTTACGATAATATCCAACAAAATTGGAACCTAGTACACCAAGCTAAATCTATGTTCCAAACATCCTCGTCAGAATCTAACTCAGAAATAGATCTTATCTCCACAAATCCACTTGACAAATCTATGTTCCAAACATTCGCCGACATCGGTATCGTCTCCGGTTCCGGAGAAGACACCGATGAGACACAAAAAACAATGAACCAAAAATTGCAACAAATGAATAACATTGTTTCATCATGTTCTATTGATTCTGAAAATTCTGATTCAGAATATTGTCCACCATTAGCAACACCAACAAAAACAAGAACTGAAAAAGATTCTTTTGAGAAAAGAGAACCTAAGAAGAGAGGAAGAAAACCATTATCAGGAACTCAAACACCAATGAACCATGTGGAAGCAGAGAGACAAAGGAGAGAGAAACTAAACCATAGATTTTACGCTTTAAGATCTGTGGTTCCAAATGTTTCAAAGATGGATAAAGCTTCTCTTTTATCAGATGCAGTGGATTACATCAATGAGTTAAAATCAAAGATTGAAGATTTAGAATCAGTGCAACAAAAGGAATCGAAAAAGGTGAAGATGGAAACGATGGAAATTGTCGATAATAACAGTGCAACGACAACTTCAACTGTGGTAGACCAAAAAAGACCTTGTAATGTTAATGCGTTTGAGATTGATGTGAAGATTATAGGAAATGATGCTATGGTGAGAGTACAAAGTGAGAATGTTAATCACCCTGGTGCAAGATTAATGAGTGTATTGAAGGATTTGGAGTTTCAGGTGCATCATGCTAGTATATCGACTGTTAATGAAGTTATGGTTCAAGATGTTGTTGTTCGAATTCCTAATGAGATGAACAAGGAAGAGAGTTTAATTAGATCCGCCATTCTCATGAAATTAGGTCAGTAG 1395 0.3599 MSPSSSSSIISLPHENENPSPQTLTLQQKLQFLVQTQSENWVYAILWQTTKDEKGKPLLSWGEGYFQGTKETTNSNKQNDSNTCANKDAEWFYVMSLTRIFSIGNASSISLPGKSFALDSVLWLNSKHELQIYNCERSNEAHVHGIETLICIPTTNGVIEMGSYDNIQQNWNLVHQAKSMFQTSSSESNSEIDLISTNPLDKSMFQTFADIGIVSGSGEDTDETQKTMNQKLQQMNNIVSSCSIDSENSDSEYCPPLATPTKTRTEKDSFEKREPKKRGRKPLSGTQTPMNHVEAERQRREKLNHRFYALRSVVPNVSKMDKASLLSDAVDYINELKSKIEDLESVQQKESKKVKMETMEIVDNNSATTTSTVVDQKRPCNVNAFEIDVKIIGNDAMVRVQSENVNHPGARLMSVLKDLEFQVHHASISTVNEVMVQDVVVRIPNEMNKEESLIRSAILMKLGQ* 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0758 464 Coils Coil 326 353 - -
Mtr8g0758 464 MobiDBLite consensus disorder prediction 244 299 - -
Mtr8g0758 464 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 287 336 IPR011598 GO:0046983
Mtr8g0758 464 CDD ACT_UUR-ACR-like 406 462 - -
Mtr8g0758 464 Pfam Helix-loop-helix DNA-binding domain 291 336 IPR011598 GO:0046983
Mtr8g0758 464 MobiDBLite consensus disorder prediction 264 281 - -
Mtr8g0758 464 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 26 181 IPR025610 -
Mtr8g0758 464 PANTHER TRANSCRIPTION FACTOR BHLH14 2 462 - -
Mtr8g0758 464 MobiDBLite consensus disorder prediction 1 21 - -
Mtr8g0758 464 MobiDBLite consensus disorder prediction 244 258 - -
Mtr8g0758 464 SMART finulus 293 342 IPR011598 GO:0046983
Mtr8g0758 464 PANTHER MYC 2 462 IPR045084 GO:0003700|GO:0006355
Mtr8g0758 464 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 287 348 IPR036638 GO:0046983
Mtr8g0758 464 Gene3D - 284 353 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0758 Mtr-Chr8 9179636 9181440 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g0758 20 462 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G00870 37.229 1.63e-73 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mtr8g0758 bHLH-MYC_N 1.6e-42 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0758 - K13422 gmx:100795733 496.893
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g0758 8 9179636 9181440 Mtr8g0758 8 9179636 9181440 ECH