Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0757 ATGAAAGATTTCATTATCTCACCATCTTCATCTTCTCATGAAAACCCTTCATCACAAACACCAACCCTTCAACAAAAGCTTCAATTTCTACTCCAAATCCAATCCGAAAATTGGATCTATGGCATTTTGTGGCAAACAACAAAAGATGAAAAAGGTAAACCTTTCTTATCTTGGGGTGAAGGCTATTTTCAAGGAACCAAAGAAACAACAACTTCAAACAAAGATGCTGAATGGTTCTACGTGATGTCGTTAACTCGAAAATTTTCCATAGGTAATGCTTCTTCAATTTCATTACCTGGTAAAGCTTTTGCTTTAGATTCTGTTCTTTGGTTGAATAGTAAACATGAACTTCAAATCTATAATTGTGAGAGATCCAATGAAGCACACATGCATGGAATCGAAACACTGATTTGTATTCCGACAACTAACGGTGTAATCGAAATGGGTTCTTATGACAATATCCAACAAAATTGGAACCTCGTGCACCAAGCTAAATCTATGTTCCAAACATCCTCGTCAGAATCAAACTCAAATTTAGATCTTACCTCCACCACCCCATTTGACAAATGTAAAACATTCATCCAAAACACATCTTTTGCCAACATGGGTGTCGTCTCTGGCGGTAGCGCGAGAGAAGACCCCCATGAGAAGCCAAAAAATTTGCAAGAAAAACATAAAAATGTTTCATCATGTTCTTTAGATTCTGAAGATTCTGATTCAGAATATTGTCCACTGTTAGCAACAAAAACAACAACAGCAAAGAACGATTCTTTTGAGAAAAGAGAACCGAAGAAGAGAGGAAGAAAACCATTAACAGGAACTCAAACACCGATGAACCATGTGGAAGCAGAGAGACAAAGGAGAGAGAAACTAAACCATAGATTCTATGCTTTAAGATCTGTGGTTCCAAACGTTTCAAAGATGGATAAAGCTTCTTTGTTATCTGATGCAGTAGATTACATCAATGAGTTAAAAGCAAAGATCGAAGATTTAAAATTAGGGCAACAAAAGGAATCGAAAAAGGCGATGATGAAAACGATGAAAATTGTCGATAATAATAGTGCAACGACAACTTCAATTGTGGTAGACCAAAACAAACCTAGTTGTAGTAAGAATCTTATTGCTTTAGAGATTGATGTGAAGATCATAGGACATGATGCTATGGTGAGAGTTCAAAGTTTGAATGTTAATCACCCTAGTGCAAGATTAATGAGTGTATTGAAAGATTTGGAGTATCAGGTACATCAGGCTAGTATATCGACCGTTAATAAAGTTGTAATGGTTCAAGATGTTATTGTTAAAGTTCCTAATGAGATGAGAAATGAAGAGAGCCTAATTAGGTCTGCAATTCTCATGAAATTATGA 1365 0.359 MKDFIISPSSSSHENPSSQTPTLQQKLQFLLQIQSENWIYGILWQTTKDEKGKPFLSWGEGYFQGTKETTTSNKDAEWFYVMSLTRKFSIGNASSISLPGKAFALDSVLWLNSKHELQIYNCERSNEAHMHGIETLICIPTTNGVIEMGSYDNIQQNWNLVHQAKSMFQTSSSESNSNLDLTSTTPFDKCKTFIQNTSFANMGVVSGGSAREDPHEKPKNLQEKHKNVSSCSLDSEDSDSEYCPLLATKTTTAKNDSFEKREPKKRGRKPLTGTQTPMNHVEAERQRREKLNHRFYALRSVVPNVSKMDKASLLSDAVDYINELKAKIEDLKLGQQKESKKAMMKTMKIVDNNSATTTSIVVDQNKPSCSKNLIALEIDVKIIGHDAMVRVQSLNVNHPSARLMSVLKDLEYQVHQASISTVNKVVMVQDVIVKVPNEMRNEESLIRSAILMKL* 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0757 454 MobiDBLite consensus disorder prediction 1 20 - -
Mtr8g0757 454 MobiDBLite consensus disorder prediction 253 286 - -
Mtr8g0757 454 MobiDBLite consensus disorder prediction 204 239 - -
Mtr8g0757 454 Gene3D - 272 341 IPR036638 GO:0046983
Mtr8g0757 454 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 23 70 IPR025610 -
Mtr8g0757 454 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 72 168 IPR025610 -
Mtr8g0757 454 PANTHER MYC 1 454 IPR045084 GO:0003700|GO:0006355
Mtr8g0757 454 SMART finulus 281 330 IPR011598 GO:0046983
Mtr8g0757 454 Pfam Helix-loop-helix DNA-binding domain 279 324 IPR011598 GO:0046983
Mtr8g0757 454 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 274 334 IPR036638 GO:0046983
Mtr8g0757 454 Coils Coil 321 341 - -
Mtr8g0757 454 PANTHER TRANSCRIPTION FACTOR BHLH14 1 454 - -
Mtr8g0757 454 MobiDBLite consensus disorder prediction 254 269 - -
Mtr8g0757 454 MobiDBLite consensus disorder prediction 210 232 - -
Mtr8g0757 454 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 275 324 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0757 Mtr-Chr8 9161003 9162378 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g0757 23 445 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G17880 32.458 1.53e-81 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mtr8g0757 bHLH-MYC_N 1e-28 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0757 - K13422 gmx:100804965 458.373