Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0756 ATGCCAGAAAATAATCCCAAGAAGAAGGTTACCTTCTCCGAAAACGACGCCGCTTCAATCACACAACGGTATGACACAAAGACCTTATTGACGTTGTTTCAGGAATTATCAAATTACCCTGATACCAAGTTTGATTGGAATGAATTGGTGAACAAAACTTCCACTGGTATTTCTAATGCCAGAGAATATCAGATGCTATGGCGCTGCTTGGCGTATGGTTATTCCTTGCCCTTGCCGCAAGATTTCAAACAAGGGGGTGGTGAACCTATGGATGATGATAGTGACCTAGATTGTGAGCTGGAATCATTTCCTTCTGTACATGTTGAAGCTAAATCAGAGTCCTCAGCATGTGCGAAGGTGATAATTGCTTCCCGCACGCTAAGTGAATCTACCCCTAATAGTTCAACAATTGAGGCTCCAATGACTGTAAATTTTCCCATTTACCGTTCATCTAGAACTTCAAAGGAAATTTCACAGCCCTCTAATTTGACGGAACAGACAAGCATTACGTTTCCAGTTACTGTTCAGAGACAGAAACTGCGAACTGTATCAGCAACAGATGCTTTAGAAACCAAGAGAACAGTTGGTGGTACCACAGCTTCCAAAAGGAAAAGAAAAGAATGGTCGGAGGAAGAGGACAATCAGCTACGTGCTGCTGTTCAGAGATGCGGTGAAGGGAATTGGGTAACCATGGCAAAAGGAGACAGCTTTCCTATTAAGAGAAGTGCAACAGAATTGTCTCAGAGGTGGAGTGCTTTACGAAAGAAAGACGGAAGTGCCAATTCAGGATCCACCGCGACCACCGTGACCACCAACACACAATATACTGCTGAGCAGTTGGCAACTCGTCGCTCCCTAAGTTTAGCTCTTGACAAGCCATTCAAAAAGTTTACTGCTCCTGGAAGGACTGATCCAGGTAGGACCTCCACACCAATTAAAAATCAAGAGCACTCTCGTAGTTCTGTAGCACCTCAGCGTCCATCTCAACAAGCTTGTGGTCCCCTGCGAAACCGAAATTGGCCTGTGAAGCATGCATCTCCACACATGGAGGCTAATTTTTAA 1062 0.4444 MPENNPKKKVTFSENDAASITQRYDTKTLLTLFQELSNYPDTKFDWNELVNKTSTGISNAREYQMLWRCLAYGYSLPLPQDFKQGGGEPMDDDSDLDCELESFPSVHVEAKSESSACAKVIIASRTLSESTPNSSTIEAPMTVNFPIYRSSRTSKEISQPSNLTEQTSITFPVTVQRQKLRTVSATDALETKRTVGGTTASKRKRKEWSEEEDNQLRAAVQRCGEGNWVTMAKGDSFPIKRSATELSQRWSALRKKDGSANSGSTATTVTTNTQYTAEQLATRRSLSLALDKPFKKFTAPGRTDPGRTSTPIKNQEHSRSSVAPQRPSQQACGPLRNRNWPVKHASPHMEANF* 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0756 353 MobiDBLite consensus disorder prediction 303 335 - -
Mtr8g0756 353 Gene3D - 197 260 - -
Mtr8g0756 353 SMART sant 204 256 IPR001005 -
Mtr8g0756 353 Pfam Myb-like DNA-binding domain 205 250 IPR001005 -
Mtr8g0756 353 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 5 340 - -
Mtr8g0756 353 MobiDBLite consensus disorder prediction 200 214 - -
Mtr8g0756 353 CDD SANT_TRF 206 255 - -
Mtr8g0756 353 ProSiteProfiles Myb-like domain profile. 200 254 IPR001005 -
Mtr8g0756 353 MobiDBLite consensus disorder prediction 292 353 - -
Mtr8g0756 353 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 200 258 IPR017930 -
Mtr8g0756 353 MobiDBLite consensus disorder prediction 191 214 - -
Mtr8g0756 353 SUPERFAMILY Homeodomain-like 203 256 IPR009057 -
Mtr8g0756 353 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 5 340 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0756 Mtr-Chr8 9106896 9113563 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mtr8g0756 Myb_DNA-binding 9.2e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0756 - - mtr:MTR_8g024690 679.093