Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0749 ATGGGGAAGAAAGGTAGTAGTTCATGGTTAACTGCTGTGAAAAGAGCATTCAGATCTCCAACAAAAGATAGTGAAAAAAGAAGTGGTAGAAGAAGAGAAGATTGTGATCAAGAAGAAGATGAAGAAAAGAAGAGAGAAAAAAGAAGGTGGATTTTTAGGAAACCAGTGAATCATGAAACAGTGAATAATACTCAACAAAGTACACCAACAAAATTGAAGCATGATGTGGTTACTGCTACAAGTGTGGCTTCAAGGACAGATCAGGATGAGAAACATGCTCTTGCTGTGGCTATGGCTACAGCTGAGGCAGCAAGAGCTACTGCTCAAGCTGCTGTGGAAGTTGCAAGGTTGACTAAGAGTTCAAATCATGCTAGGGAGCATTATGCAGCTGTTGTGATTCAAACTTCTTTTAGAGGTTATTTGGCAAGAAGAGCACTCCGTGCGCTTAAGGGGTTAGTGAAGTTGCAAGCTTTAGTGAGAGGTCACAATGTTAGGAAGCAAGCAAAGATGACACTTAGGTGCATGCAAGCTCTTGTTAGAGTACAAGCAAGAGTTCTTGACCAAAGGATAAGGTCTACTTCACATGAAGGAAGTAGAAAATCAACCTTCAGTGATACTGCTAGTGTTTGGGATTCGCGGTATCTTCAAGACATTTCAGATAGGAAATCACTATCAAGAGAAGGAAGTAGTATTGCAGATGATTGGGATGATCGTCCGCACACAGTTGAAGAAGTTAAGGCCATGTTGCAGCAGAGGAAAGAAGCAGCAATGAAGAGGGAAAAGTCCTTGTCCCAAGCATTTTCACAACAGATTTGGAGAAATGGCAGGACATCATCAATTGGAAATGAAGATGAACTTGAAGAGAGACCAAAATGGCTAGATAGATGGATGGCTACAAAACCGTGGGAGAATAGGGGAAGGGCTTCAACCGATCAAAGAGACTCTATTAAGACTGTGGAAGTCGACACATCTCAACCTTATTCATATCTAGGAGCAAATTACAGAAGATCACATCCAAATTATCAATATAATCCACATCACCAACCACAAAGACATTCCATTGCTTCACCGCTCCATAGATCACACCAAAATGGTTCCGTTCACAACCAATCCACCACTACTCCATCTCCAGCAAAGTCAAGACCTATTCAAGTCCGATCGTCAAGCCCTCGCTGTGTTCGAGAAGATAGAAGCTACCACCATACCTCTCAAACACCAAGCTTGAGGTCTAATTACCATTACAATGGGAACTTGTACCAAAATAGCAGGGGTGGAACAAGTAATGGTAGTACTAATAGTATTGCTTCTACTACTGCTTCAGCTACATTGCCTAATTACATGCAAGCAACCGAGTCTGCGAAGGCTCGAATTCGGTCACAGAGTGCACCAAGGCAAAGGCCATCGACACCAGAGAGGGATAGATCCGGATCAGTAAAGAAAAGGCTTTCTTTCCCTGCTCCTGATCCTTATAATGTAGGAGGAGTTGGTTATGGAAATTATGGACATAGTTTAAGGAGTCCAAGTTTCAAGAGTGTGAATGTAGCAGCATCACATTATGGATTGGAGCAAAATTCCAATTACTCTTCTTGTTGTACTGAGAGTCTTGGTGGCGAGGTTTCGCCTTCTTCAACCGGTGACCTTAGACGATGGTTGAGATGA 1659 0.4237 MGKKGSSSWLTAVKRAFRSPTKDSEKRSGRRREDCDQEEDEEKKREKRRWIFRKPVNHETVNNTQQSTPTKLKHDVVTATSVASRTDQDEKHALAVAMATAEAARATAQAAVEVARLTKSSNHAREHYAAVVIQTSFRGYLARRALRALKGLVKLQALVRGHNVRKQAKMTLRCMQALVRVQARVLDQRIRSTSHEGSRKSTFSDTASVWDSRYLQDISDRKSLSREGSSIADDWDDRPHTVEEVKAMLQQRKEAAMKREKSLSQAFSQQIWRNGRTSSIGNEDELEERPKWLDRWMATKPWENRGRASTDQRDSIKTVEVDTSQPYSYLGANYRRSHPNYQYNPHHQPQRHSIASPLHRSHQNGSVHNQSTTTPSPAKSRPIQVRSSSPRCVREDRSYHHTSQTPSLRSNYHYNGNLYQNSRGGTSNGSTNSIASTTASATLPNYMQATESAKARIRSQSAPRQRPSTPERDRSGSVKKRLSFPAPDPYNVGGVGYGNYGHSLRSPSFKSVNVAASHYGLEQNSNYSSCCTESLGGEVSPSSTGDLRRWLR* 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0749 552 Gene3D - 123 185 - -
Mtr8g0749 552 MobiDBLite consensus disorder prediction 327 492 - -
Mtr8g0749 552 MobiDBLite consensus disorder prediction 303 318 - -
Mtr8g0749 552 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 123 170 IPR027417 -
Mtr8g0749 552 MobiDBLite consensus disorder prediction 303 322 - -
Mtr8g0749 552 ProSiteProfiles IQ motif profile. 150 177 IPR000048 GO:0005515
Mtr8g0749 552 MobiDBLite consensus disorder prediction 327 387 - -
Mtr8g0749 552 Pfam IQ calmodulin-binding motif 153 169 IPR000048 GO:0005515
Mtr8g0749 552 Pfam IQ calmodulin-binding motif 129 147 IPR000048 GO:0005515
Mtr8g0749 552 MobiDBLite consensus disorder prediction 1 46 - -
Mtr8g0749 552 MobiDBLite consensus disorder prediction 533 552 - -
Mtr8g0749 552 ProSiteProfiles IQ motif profile. 126 154 IPR000048 GO:0005515
Mtr8g0749 552 SMART iq_5 125 147 IPR000048 GO:0005515
Mtr8g0749 552 SMART iq_5 148 169 IPR000048 GO:0005515
Mtr8g0749 552 MobiDBLite consensus disorder prediction 18 46 - -
Mtr8g0749 552 MobiDBLite consensus disorder prediction 403 466 - -
Mtr8g0749 552 Pfam Protein of unknown function (DUF4005) 389 498 IPR025064 -
Mtr8g0749 552 PANTHER PROTEIN IQ-DOMAIN 1-LIKE ISOFORM X1 1 552 - -
Mtr8g0749 552 PANTHER IQ-DOMAIN 5-RELATED 1 552 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0749 Mtr-Chr8 9029959 9033837 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g0749 1 552 IQD Protein Family AT1G01110 57.739 0.0 523
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0749 - - gmx:100786729 818.535
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g0749 8 9029959 9033837 Mtr8g0749 8 9029959 9033837 ECH