Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0747 ATGCCTGATAACATGAGTATATCTGTTAATGGACAATCTCAAGTTCCTCCTGGATTCCGGTTTCATCCTACTGAAGAAGAGCTTCTTCAATACTACTTGAGGAAAAAAGTCTCTTATGAGAAGATTGACCTTGATGTTATTCGTGATGTTGATCTCAACAAGCTTGAACCATGGGACATTCAAGAGAAATGCAAAATAGGAACGACTCCGCAGAATGATTGGTACTTCTTCAGCCATAAAGACAAGAAGTATCCAACCGGAACAAGAACCAATCGCGCTACGGCTGCAGGGTTCTGGAAAGCCACCGGTCGTGACAAAGTTATATATAGTAATGGAAAAAGGATTGGAATGAGAAAGACTCTTGTTTTCTACAAAGGTCGTGCTCCTCATGGCCAAAAATCTGATTGGATCATGCATGAGTATAGACTCGACGATAACACCACCAATGACACCAATCTGGTGTCGAATATGATTGGTGATGGTGGTCAAGAAGAAGGATGGGTGGTGTGTAGGATATTCAAGAAGAAGAATCATCTCAAAACCCTAGACAGCCCTTCTGGAGAGGGAAGAAGAAGCCATCACTTGTATGATACTTGTGATGAAGGAGCTTTGGAGCAAATACTTCAACAAATGGGAAGGGGTTGCAAGGAAGAGAATTATGAAGCAAATTACAATAATAATTATGGAAGGTTTGCTAGGCCTTTTGAATCTACTCTCAACAACAATGGTGGTTATAACAATGAAAGGTTCATGAAACTTCCAAATTTAGAAAGTCCAAAATCAACAAGCATGGAGAACAATGAGAACAACAATGATGGGTATCATGCAATTATTCAAGTAGATATGGCTAATGAAAATGAAGGGTCATTCTCTGATCATCATCATCATCATCATCATAACAACATGGTTAATAATCCATTAGAGGCATCATCATCATCAATGGTGATAGCATGTGGTGATGGTGGTCTTACTAATTGGGTAGCTTTGGATAGGCTTGTTGCTTCTCAATTGAATGGACAAACTGAGGCTTCTAGGCAATTGGCTTGCTTTACTGACCCCACAATGGGATATTGCACTAATGATCAAGATCTTCAACTTCCCACACTTAAATCATCATCATCAACTTCATCACTATCAACACACGCCAGAACTACTACTTCTACTACTACTACTACAGCTACTGCTTACATTAGTCCCTCACATGACTATGCAAGTGAGATTGATCTGTGGAACTTTGCTCGATCAACTTCATCCTTGTTGTCGTCTTCTGAACCACTATGTCATGTGTCGAATACGTCAGTGTGA 1305 0.4 MPDNMSISVNGQSQVPPGFRFHPTEEELLQYYLRKKVSYEKIDLDVIRDVDLNKLEPWDIQEKCKIGTTPQNDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKVIYSNGKRIGMRKTLVFYKGRAPHGQKSDWIMHEYRLDDNTTNDTNLVSNMIGDGGQEEGWVVCRIFKKKNHLKTLDSPSGEGRRSHHLYDTCDEGALEQILQQMGRGCKEENYEANYNNNYGRFARPFESTLNNNGGYNNERFMKLPNLESPKSTSMENNENNNDGYHAIIQVDMANENEGSFSDHHHHHHHNNMVNNPLEASSSSMVIACGDGGLTNWVALDRLVASQLNGQTEASRQLACFTDPTMGYCTNDQDLQLPTLKSSSSTSSLSTHARTTTSTTTTTATAYISPSHDYASEIDLWNFARSTSSLLSSSEPLCHVSNTSV* 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0747 434 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 9 383 - -
Mtr8g0747 434 Gene3D NAC domain 24 180 IPR036093 GO:0003677|GO:0006355
Mtr8g0747 434 PANTHER NAC DOMAIN-CONTAINING PROTEIN 12 9 383 - -
Mtr8g0747 434 SUPERFAMILY NAC domain 9 175 IPR036093 GO:0003677|GO:0006355
Mtr8g0747 434 ProSiteProfiles NAC domain profile. 15 175 IPR003441 GO:0003677|GO:0006355
Mtr8g0747 434 MobiDBLite consensus disorder prediction 370 390 - -
Mtr8g0747 434 Pfam No apical meristem (NAM) protein 16 143 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0747 Mtr-Chr8 8983937 8985930 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g0747 1 433 NAC Transcription Factor Family AT2G46770 52.018 1.09e-136 395
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mtr8g0747 NAM 4.1e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0747 - - gmx:100793308 600.127
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g0747 8 8983937 8985930 Mtr8g0747 8 8983937 8985930 ECH