Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0736 ATGAATGAAGAAATTGAATTAATAAGAAAAATGAATGAAATAGAAGAGAAGAAGAAGAAAGAGGACGGTGTATTTAGATGGGAAATGTTTCTACCAAGAAAAAATGTTACTGTTCTTCTTGTTGAATCTGATCGTGCTACTCGGAGGTTAATTACTTCACTTCTAAATAATTGCCATTACAAAGTTATTGCGGTTTCTAATGGATCAAAAGCATGGGAGATGATGAAGATGAAGGCAATTGACGTTGATCTCGTATTAACAGAAATGGAGTTGCCGGCAATATCTGGATTTGCACTTCTTTCGTTAATTATGGAGCATGAAATTGGCAGAAATATTCCTGTTATAATGATGTCTTCTCGTGATTCACGTAGCACGGTAATGAAGTGCATGTGTAGAGGTGCAGCTGATTTTCTTATCAAACCTGTTCGGAAGAATGAGCTTACGAACTTATGGCAGCATGTCTGGAGAAAGCACGTTATTAGCAGGCCTCTCCAAAATACAACATCTGCACAAAGTAACCTTAAAATTGCGACAGAAGACAATTTTCCTCGCAGCCAATCGACTGATTCTGCTTCTGTGGCTTCCTCACAGAAAAATAATGAATGCAGTGAGAAATTGAGCAAGTCTCAAAGCACATGTGCAATGCCATTTTCTGATGCTAAGAATCTATACATGGATAATATGCAAAAGCCCTGTCAGATGAAGAGTTCTGTGAAATTACGCAACATTGATGTGTTGAAGCATGCAGAGTCTAACAAAATTGAAAGAGGATCAACTAAGCAAAATGATGAAACAGGAGATTCAAGGCTAGAACAAGACTGCAGTACTGCTGAAATTGAACCCAAATGTGAAATATTTAAAGCTGAGTCAAGCAGAGAGAACCCCGATATTGATACCGAGATACGTGAATGTAGTAATGAACTGATAGAACCTTCTAGCAGAGCTGTCGACTTGATTTCCACATTTGGGAATCTCCATAAGCGCACTAAGGAAATCCATGTTACTAATGGGGATAAAGAAACCAAGTTTGATTTTGAAAAAGAACTGGAGCTTTCTTTAAGAAGTGATTTTTCTGGCAGCTCATGCAAACAAGCAAGTGAAACAACTGAGGAGTGGCAAAGATTGAACCACTCAAATGCTTCTGCCTTTTCTCGGTACGATGGCAGTAAGATGTTGCAGCAACTTCTTCAAAACTCCAATTGGAATTCTAATAAGTCTCAGGAACTATCTGTAGTTACTGCTGGTAATTGTTTTCAGTATGCTGGCTCAATTAAAATGGAAAATATGACCACTGCAGTCATGGCTCAGTATGAACAACTTGGACTCTCAGCTGATAATGTTTTCCATCACATGTTGACTCCTAAATCAAATTGCCAAAAAGAGAGCTCTCCCTTTCCATCAAGTTCCTCCTCCCAGTCCAATCCTGAAAGTCACAATTCAGAACATGATCATAATTGCTGTTATGACGCTAACTACAGTTTTCACAACCAAAACCTTACTGAAAAAACTGATTTGGATCATGCAGTGCATGATTCTCCTAGTGCTGGTCAGGGTTTTGGCAATGACTTTTGTCATGCTTCAAATCATATTAATAGTCGTGGCAATGTTGGAGAGGCTATTTCAAATGCGGTTACTAAGAATTCAAGAACTTCTAGTGATGGTAGGCGCTATAATCATAGTAATTATGATTATGATTGTGATGATGACGATTATGAATTTAGATTGAGTGATTCTCATCGCTCTCGTCAAAGAGAAGCAGCTCTAACAAAGTTTCGATTAAAGCGAAAAGAGAGATGCTTCGAGAAAAAGGTTCGATATCAGAGTCGGAAAAAACAGGCAGAGCAGCGTCTTCGGGTTAAAGGGCAGTTTGTACGCAAAGTACAAAATGATGATCATCCAAATGTAGATAGTGGTGATCAATGA 1923 0.3843 MNEEIELIRKMNEIEEKKKKEDGVFRWEMFLPRKNVTVLLVESDRATRRLITSLLNNCHYKVIAVSNGSKAWEMMKMKAIDVDLVLTEMELPAISGFALLSLIMEHEIGRNIPVIMMSSRDSRSTVMKCMCRGAADFLIKPVRKNELTNLWQHVWRKHVISRPLQNTTSAQSNLKIATEDNFPRSQSTDSASVASSQKNNECSEKLSKSQSTCAMPFSDAKNLYMDNMQKPCQMKSSVKLRNIDVLKHAESNKIERGSTKQNDETGDSRLEQDCSTAEIEPKCEIFKAESSRENPDIDTEIRECSNELIEPSSRAVDLISTFGNLHKRTKEIHVTNGDKETKFDFEKELELSLRSDFSGSSCKQASETTEEWQRLNHSNASAFSRYDGSKMLQQLLQNSNWNSNKSQELSVVTAGNCFQYAGSIKMENMTTAVMAQYEQLGLSADNVFHHMLTPKSNCQKESSPFPSSSSSQSNPESHNSEHDHNCCYDANYSFHNQNLTEKTDLDHAVHDSPSAGQGFGNDFCHASNHINSRGNVGEAISNAVTKNSRTSSDGRRYNHSNYDYDCDDDDYEFRLSDSHRSRQREAALTKFRLKRKERCFEKKVRYQSRKKQAEQRLRVKGQFVRKVQNDDHPNVDSGDQ* 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0736 640 Coils Coil 596 616 - -
Mtr8g0736 640 PANTHER TWO-COMPONENT RESPONSE REGULATOR 12 236 IPR045279 GO:0009736
Mtr8g0736 640 PANTHER TWO-COMPONENT RESPONSE REGULATOR 240 637 IPR045279 GO:0009736
Mtr8g0736 640 ProSiteProfiles Response regulatory domain profile. 37 155 IPR001789 GO:0000160
Mtr8g0736 640 MobiDBLite consensus disorder prediction 249 272 - -
Mtr8g0736 640 Pfam Response regulator receiver domain 38 149 IPR001789 GO:0000160
Mtr8g0736 640 PANTHER PRR RESPONSE REGULATOR 240 637 - -
Mtr8g0736 640 PANTHER PRR RESPONSE REGULATOR 12 236 - -
Mtr8g0736 640 Gene3D - 36 283 - -
Mtr8g0736 640 MobiDBLite consensus disorder prediction 455 482 - -
Mtr8g0736 640 ProSiteProfiles CCT domain profile. 584 626 IPR010402 GO:0005515
Mtr8g0736 640 SMART REC_2 36 151 IPR001789 GO:0000160
Mtr8g0736 640 SUPERFAMILY CheY-like 35 167 IPR011006 -
Mtr8g0736 640 Pfam CCT motif 584 626 IPR010402 GO:0005515
Mtr8g0736 640 MobiDBLite consensus disorder prediction 177 205 - -
Mtr8g0736 640 MobiDBLite consensus disorder prediction 455 476 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0736 Mtr-Chr8 8877384 8882216 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g0736 567 633 Response Regulator Gene Family AT5G24470 62.687 8.53e-20 91.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Mtr8g0736 Response_reg 3.3e-21 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0736 K12130 - gmx:100791698 549.666
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g0736 8 8877384 8882216 Mtr8g0736 8 8877384 8882216 ECH
Mtr8g0736 8 8877384 8882216 Mtr7g3915 7 55909136 55913290 ECH