Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0733 ATGGAGAGGCTTCAAGGACCCATCAATTCTTGTTTCTTTGGTGAAGTGAATTGTTTAGACCAAACATTACTTGATGAACAAAGTTTGAGATTTGAAGAGGAAGAGCAATTTCTCATATCAAGTTTAGAAGATAACATGCCATTTCTTCAAATGCTACAAAGTGTTGATTCTCCACAGTTTTTTCCTTTGAAAGAACAAAACTTTCAAACACTTTTAAGGCTACAACATATGAAAAAACCATGGGAAGACATAGCTTACATTCCTAGAATGGATTCACAACAAGTTCAAGGCACAACATTGGAATTTGAAAGCTGCGTAACACAAGAAATGTTGGAGATGCAATCACCAGTGAAATCAGAAAGCAATAAAGTTTCACTTTCAACTTCATGCATTGAGAAAACAAGCTATGAATGTAACCAACAAGAAGAAACAAAAACAGCACAATCATGTTCCAAATCTCAACAAGGAACAACAAGGGAAAAGAGAAAGAGAAAAAGAACAAGACCGGTTAAGAATAAGGAAGATGTTGAGAATCAAAGAATGACACACATTGCTGTTGAACGTAATAGGAGACGCCAAATGAATGATCATCTCAGTGTTCTTAGGTCTCTCATGCCCTCTTCATATGTTCAAAGGGGTGACCAAGCATCAATAATTGGAGGAGCAATTGATTTTGTGAAAGAGTTAGAACAATTGCTTGAATCTCTTGAAGCACAAAAAAGGATAAAAAAGAATGAAGATTTTGGTTCCTCATCATCATCATCACCACCTAGTTATGGAATGAAATTATCACCTTATGAAGAAAATGAGGTAAAGGCAGAAAACAAATCAGAAGCAGCAGATATAAAAGTGACATTGATTCAAACCCATGTGAACTTGAAAATTGAGTGCAAAAAAAAGGCTGGTCAATTGATAAAGGTTATTGTTGCTTTGGAAAATCTTAGGCTAACTATTCTTCACCTAAACATCACATCTTTTGAGTCTTCTGTACTCTACTCCTTCAATCTCAAGATTGAAGAAGACTGTAAGCTAGGCACAGCAAATGATATAGCAGAAGCAGTTCATCAAATATTCAGCTACATCAATAATGGTAGCTAA 1098 0.3534 MERLQGPINSCFFGEVNCLDQTLLDEQSLRFEEEEQFLISSLEDNMPFLQMLQSVDSPQFFPLKEQNFQTLLRLQHMKKPWEDIAYIPRMDSQQVQGTTLEFESCVTQEMLEMQSPVKSESNKVSLSTSCIEKTSYECNQQEETKTAQSCSKSQQGTTREKRKRKRTRPVKNKEDVENQRMTHIAVERNRRRQMNDHLSVLRSLMPSSYVQRGDQASIIGGAIDFVKELEQLLESLEAQKRIKKNEDFGSSSSSSPPSYGMKLSPYEENEVKAENKSEAADIKVTLIQTHVNLKIECKKKAGQLIKVIVALENLRLTILHLNITSFESSVLYSFNLKIEEDCKLGTANDIAEAVHQIFSYINNGS* 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0733 365 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 178 246 IPR036638 GO:0046983
Mtr8g0733 365 Coils Coil 226 246 - -
Mtr8g0733 365 MobiDBLite consensus disorder prediction 141 155 - -
Mtr8g0733 365 MobiDBLite consensus disorder prediction 244 263 - -
Mtr8g0733 365 SMART finulus 184 235 IPR011598 GO:0046983
Mtr8g0733 365 Pfam Helix-loop-helix DNA-binding domain 179 230 IPR011598 GO:0046983
Mtr8g0733 365 PANTHER MAX DIMERIZATION, MAD 18 363 - -
Mtr8g0733 365 MobiDBLite consensus disorder prediction 141 179 - -
Mtr8g0733 365 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 178 229 IPR011598 GO:0046983
Mtr8g0733 365 Gene3D - 169 246 IPR036638 GO:0046983
Mtr8g0733 365 PANTHER TRANSCRIPTION FACTOR BHLH70 18 363 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0733 Mtr-Chr8 8852522 8856085 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g0733 40 363 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G01460 43.072 1.56e-69 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mtr8g0733 HLH 1.2e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0733 - - gmx:100789928 536.184
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g0733 8 8852522 8856085 Mtr8g0733 8 8852522 8856085 ECH