Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0730 ATGGATTTGGTGGGACCCACAATGACCAGATTGGTCGGGGATTACATACTGGGTCCTCGTATCGGTTCAGGTTCATTTGCAGTGGTGTGGCGTTCACGTCATCGAAATTCAGGTTTGGAGGTAGCAATTAAGGAAATTGATAAGACCCAATTGAGTTCTAAAGTTAGAGATAATCTCATCAAAGAGATTTCTATTCTTAGTACTATTCATCATCCTAATATCATTCAACTCTTTGAAGCTATTCAGACGAATGATAGGATTTATCTTGTTTTGGAGTATTGTGGTGGAGGGGATCTTTCTGCTTATATTCAGCGATATGGGAGAGTTTCTGAATCTGTTGCTAGACATTTCATGAGGCAGTTGGCTGCCGGTTTGCAGGTGCTTCAAGAAAAGAACCTCATACATAGAGATTTAAAACCACAGAACTTACTATTGGCAACTACTTCAGCTACACCACTTATGAAAATAGGAGATTTTGGTTTTGCACGGTCTCTCACACCTCTGCAGTTGGCAGATACACTATGTGGTTCACCTTATTACATGGCTCCTGAGATAATTCAGAGTCAGAAGTATGATGCAAAGGCTGATTTGTGGAGTGTTGGTGCAATATTGTATCAGCTAGTTGTTGGGAAACCTCCATTTGATGGAAATAGTCAATTGCAGCTTTTTCAAAATATATTGGCATCTACTGAACTGTACTTTCCACCAACGATTTTAAAAGAGCTACATCCTGATTGCGTGGATCTTTGCAGAAGCCTTTTACGTCGAGATCCAGATGAGAGATTAACATTCAAGGCATTCTTCAGTCACAACTTCCTACAGGAACACAGGTCCATCGTGAATATCGAGCAGTTTCATTCACATCAATCAGATAGCTCAATGGTTAATCAATTAGTTGGCTCTGCATTCGAGAAGGAGTCTCAATCACATTCCAAGTATCATGTTGAGTCATTTGTAGATGATCCAGTGGCAGTCAGTTCAGCGGTCAATGAAACCATGCTTTTGCAAAGAAAGGGTGGCAAGAGCACAACTGACACCCAGAGTGCTAAAGGGTTGAATCCAACTAATGCACACGATAAGCCGGGGAAGTCCATTGATGTTGATATTAATTTGTCAAACCAAGCTCGAGTTTCACATTTAATGGAGTCCATTGAGAAAGGTTATGTCCTCATCAATCCTCATTTTACATCATCGGAGGATTTCTCTGACTACTTTGAGGCATCTGCATCTGTGCAAGATAATCCCTCAAGTGGCGTTTCTATCTGTCCTTTAAAGGGGACTTCTAACCTAGACATTGGAAAGCAAACTAAGGATCCGTCGTCTTCTTCAACTGATGGGTTAAACAATTTTAAAAGCAATGAACTCGATGCATTTGTAGCATCATGTGAATTTTCTACGGTAAGGAAAGAGCGGGAATTTTCTTTACTGTACCCTTCAAACAGGTTAGAGATGCTGGATCAGTATGTGCAAGTCCTTGGTGAACTTTCGCAAGAAAAGTATAACACGGGATTATATCTAGAATCGCTTGCGGTTGAGTTGGTGGTTTTGGCTATATGGAAGAAAGCTCTAGACATCTGTAGCACTTGGTCGGTCCCCATATCCGAGGGTGAGTTGAATGGAAGAAGTTCAATTAACGAGTCCATAATTGCCAGTGGAGACGCGAGCTTATCACAGACTATGGAACAGAAAATAAATTTTAGTGACCATTCTTCCGTCTCTTTGTGGGCCAAACATGGATTTGTCATTGCAGTCAATCGTGCTGAGAAACTATCATGTCATATTCAAAATATGGATGGTGCAGTTGAGATGCCAGATGCAATGGACATTATATTCCAACAAGCACTCCTTGTTGGGACAAATGCTGCTGTAGATGAGTATATGAATAACAAAGATAAGTCTGCTGAATCTTACTCAAAAGCAATGCTTCTACTTTCATTTATTGTGGGAGAAGCAGAGAACCTTCCACTGAATCCTCCATTTTCACTTCTTGCTGATGATCAGAAGCGAATCGTGCAATATATTTGCAACTTGCAGTTTCACAAAAAATCTTTGACAGAATCTGCTTCAAGGGAATCCCATACTCTTCCGTGA 2091 0.407 MDLVGPTMTRLVGDYILGPRIGSGSFAVVWRSRHRNSGLEVAIKEIDKTQLSSKVRDNLIKEISILSTIHHPNIIQLFEAIQTNDRIYLVLEYCGGGDLSAYIQRYGRVSESVARHFMRQLAAGLQVLQEKNLIHRDLKPQNLLLATTSATPLMKIGDFGFARSLTPLQLADTLCGSPYYMAPEIIQSQKYDAKADLWSVGAILYQLVVGKPPFDGNSQLQLFQNILASTELYFPPTILKELHPDCVDLCRSLLRRDPDERLTFKAFFSHNFLQEHRSIVNIEQFHSHQSDSSMVNQLVGSAFEKESQSHSKYHVESFVDDPVAVSSAVNETMLLQRKGGKSTTDTQSAKGLNPTNAHDKPGKSIDVDINLSNQARVSHLMESIEKGYVLINPHFTSSEDFSDYFEASASVQDNPSSGVSICPLKGTSNLDIGKQTKDPSSSSTDGLNNFKSNELDAFVASCEFSTVRKEREFSLLYPSNRLEMLDQYVQVLGELSQEKYNTGLYLESLAVELVVLAIWKKALDICSTWSVPISEGELNGRSSINESIIASGDASLSQTMEQKINFSDHSSVSLWAKHGFVIAVNRAEKLSCHIQNMDGAVEMPDAMDIIFQQALLVGTNAAVDEYMNNKDKSAESYSKAMLLLSFIVGEAENLPLNPPFSLLADDQKRIVQYICNLQFHKKSLTESASRESHTLP* 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0730 696 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524
Mtr8g0730 696 MobiDBLite consensus disorder prediction 338 354 - -
Mtr8g0730 696 Pfam Protein kinase domain 19 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g0730 696 MobiDBLite consensus disorder prediction 338 364 - -
Mtr8g0730 696 Gene3D Transferase(Phosphotransferase) domain 1 7 355 - -
Mtr8g0730 696 SUPERFAMILY Protein kinase-like (PK-like) 11 323 IPR011009 -
Mtr8g0730 696 SMART serkin_6 15 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g0730 696 CDD STKc_ATG1_ULK_like 21 272 - -
Mtr8g0730 696 ProSitePatterns Serine/Threonine protein kinases active-site signature. 133 145 IPR008271 GO:0004672|GO:0006468
Mtr8g0730 696 PANTHER SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED 473 674 IPR045269 GO:0004674|GO:0006914
Mtr8g0730 696 PANTHER SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED 9 300 IPR045269 GO:0004674|GO:0006914
Mtr8g0730 696 PANTHER BNAC06G18300D PROTEIN 473 674 - -
Mtr8g0730 696 PANTHER BNAC06G18300D PROTEIN 9 300 - -
Mtr8g0730 696 ProSiteProfiles Protein kinase domain profile. 15 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0730 Mtr-Chr8 8798954 8805317 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g0730 7 346 CBL-interacting serine-threonine protein kinases AT4G14580 35.057 4.84e-50 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-3 Mtr8g0730 Pkinase 2.5e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0730 - K08269 mtr:MTR_8g024100 1366.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g0730 8 8798954 8805317 Mtr8g0730 8 8798954 8805317 ECH