Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0729 ATGTTTAATGTTGTTGTCCTCATGAAATCTTTTCTTACTATCATTTTTCTACTTCTTTTGTTCTTTCCTTTAACTTCTTCCCTCCAACAAGTGCAAACAAAACTAGTTGAACCACCTTTGCTTCCAAAAAATTCATGCAATGAAACATGTGGAAAACTCCATGTTCCATTTCCATTCTACATCAACAACACTTCATGTGCTTCATTGTCAAGTTCTTTCCACCTCTCTTGCTCAAATTCATCCACCCTTTTGATCAAAATAGGTTCACAAAACTATCCCATTTTGGAATTCTTTTCAGATGGTTTGTTAGTAGACTTTCCAGGAACCTCATCGTGTCGACAGTACAACGATTTGAATTCATTTGGTGAGAGGAGTTTTGATGGAAGAAACTACTTTGGTGTATCAGTTGATAATGTTGTTGGTCTGTATGATTGTGAAGATTCTTCACTTTGTAAAGCAGATTGTGAAACAGTTAATCTTCCTGGTTGTGATGGAAGTGTTGGTGGTGGTTCTCTTGGATGTTGTTATCCACTTTCTGATCATAGTATATGGCATATTGGTGAAGGGTTTTCTGTTTTTTCACAATTTGGATGTAGGGGATTTTCTAGTTGGGCTGTTTTGAGAGGGTCTTATTCAGGTAAAAGAGGGGTAAAATTGGAATTTGGTATTCCTAGGAACTTTTCTAAGGAGATTTGTGCTAAGAATGCAGATATGGTGAATGCTACAGCAGTTAAAGGTGGCATAAGGTGTGTTTGTCAAGATGGATTTGTTGGTGATGGTTTTGTTAATGGAACAGGATGCTTATTATCATGTATCAAGAATGGAAAGGAAGCATATGGAAGTGACTGCTATATCAAAAGACATGATCAAAGAAAAATGGTTATCATTGCTGGAATTCTTTGTCCAGTTCTTATTGTTGCCTCCTTAGTTACACTATTCTATCTTCTAAAAAGAAAACAAAGGCCAGGAATGTTCGATTCTGAGCAAGCTTATTACCACAACATTTCATTCCGAAAAACGTGTAGAACTCGACTATTCAGCCACCATGAGCTAGAGGAAGCCACCAATGGTTTTGAAGATAACAGAAAACTCATGCAATGCAATAACAGCACAATGTTTGCCGGTGTTCTTGGTGATGGATCGCATGTAGCTATACACAAGTTATTAAAATGTGAGAATGAAAAAGACATGATGCAAGTCATGTCACAAATTGAAGTCCTATCTACAATTGTACATAGAAATGTTGCATCAATTCTTGGCTGTTGCATTGATTCTAGCTACACTCCTCTAGTGGTTTATGAATATCCTTCAAATGGTACCTTAGAGGATCATTTACACCAAAAGTTCCAAAACATAGGACAAAAGCTTGGTTTACATTGGTATAGGAGATTGAATATTGCAACAGAAATAGCTAGTACTATTGCATTGTTACATTATGATAAATCTCCTCCAATATTCCATCATAACCTAAAGTCTAGTTGCATCTTCCTAGGTGATGATTTTTCTGTCAAGATTGCAGGATTTGGAATACATAATTCTGATGTTAATAATTATGATTACAAGAATTGTGAAACTCGCGAACACTTTCGCTTGTGCAAAAATGATGTCTACGACATAGGTTTGTTGCTACTCGAGATTATCTACGGAACAAATCAATTGGACTCACCTACATTAGCCTTGAAGAAAATTAGGGATGGAAAGATCGAAGAAATTGTCGATCCACTTCTTAATTATTACGAACAACCGCGTCATTGTCAAGAACAGATTCAGATCATTGCTGACCTTGCCACAAGATGTTTTCTGTTTAGTGGAGATGGAAAGATGGGAATGATTGATGTTGCTAGGGAATTGGTTCATTTGACAAAAGATAGTGTTGATGGAGGAAATGTGAAAGGAATTGCTCTTGAAGAAACATTCTCAAATTCTAGTCTTCTTCAAATGATATCTTTGTCTCCTGATTCTATGAATGTTCCTTGA 1977 0.3632 MFNVVVLMKSFLTIIFLLLLFFPLTSSLQQVQTKLVEPPLLPKNSCNETCGKLHVPFPFYINNTSCASLSSSFHLSCSNSSTLLIKIGSQNYPILEFFSDGLLVDFPGTSSCRQYNDLNSFGERSFDGRNYFGVSVDNVVGLYDCEDSSLCKADCETVNLPGCDGSVGGGSLGCCYPLSDHSIWHIGEGFSVFSQFGCRGFSSWAVLRGSYSGKRGVKLEFGIPRNFSKEICAKNADMVNATAVKGGIRCVCQDGFVGDGFVNGTGCLLSCIKNGKEAYGSDCYIKRHDQRKMVIIAGILCPVLIVASLVTLFYLLKRKQRPGMFDSEQAYYHNISFRKTCRTRLFSHHELEEATNGFEDNRKLMQCNNSTMFAGVLGDGSHVAIHKLLKCENEKDMMQVMSQIEVLSTIVHRNVASILGCCIDSSYTPLVVYEYPSNGTLEDHLHQKFQNIGQKLGLHWYRRLNIATEIASTIALLHYDKSPPIFHHNLKSSCIFLGDDFSVKIAGFGIHNSDVNNYDYKNCETREHFRLCKNDVYDIGLLLLEIIYGTNQLDSPTLALKKIRDGKIEEIVDPLLNYYEQPRHCQEQIQIIADLATRCFLFSGDGKMGMIDVARELVHLTKDSVDGGNVKGIALEETFSNSSLLQMISLSPDSMNVP* 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0729 658 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 55 653 IPR045274 GO:0007166
Mtr8g0729 658 Gene3D Transferase(Phosphotransferase) domain 1 437 631 - -
Mtr8g0729 658 Gene3D Laminin 229 263 - -
Mtr8g0729 658 PANTHER OS10G0351500 PROTEIN 55 653 - -
Mtr8g0729 658 SUPERFAMILY Protein kinase-like (PK-like) 339 617 IPR011009 -
Mtr8g0729 658 Pfam Wall-associated receptor kinase galacturonan-binding 46 97 IPR025287 GO:0030247
Mtr8g0729 658 Gene3D Phosphorylase Kinase; domain 1 329 435 - -
Mtr8g0729 658 Pfam Protein tyrosine and serine/threonine kinase 379 524 IPR001245 GO:0004672|GO:0006468
Mtr8g0729 658 ProSiteProfiles Protein kinase domain profile. 358 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0729 Mtr-Chr8 8785778 8789038 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g0729 46 620 Receptor kinase-like Gene Family AT2G23450 28.710 5.05e-53 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Mtr8g0729 PK_Tyr_Ser-Thr 1.2e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0729 - - gmx:100810557 883.248
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g0729 8 8785778 8789038 Mtr8g0729 8 8785778 8789038 ECH