Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0724 ATGACAACCTCATTTTCTCTCATTCATGATTGTCTTCCTGTTGGATTCAGATTCCATCCAACAGATCAAGAGCTTGTAAACTACTATCTCAGAAACAAGTTACTTGGCAATGAAGAGTTTGTTAACAATGTCATAGCTGAAGTTGATGTATTCAAGTTTAAACCTTGGGATTTACCAGCTCATTCAGTGATAAGATCCGATGACTCGGAATGGTTTTTCTTGTGTCCTCGCAATTACAAGTATCAAAGGTGTAATAAGTTTAAGAGAGGAACAGAGTTTGGATTTTGGAAAGCTACTGGAAAAGATCATTCGGTTAAGATTAGAGGAACTGATGAAGTTATTGGGACGAAGAAAACTCTTGTTTACTACCTTGCTCCTCATCCTGGTGTTAAAACCAATTGGGTTATTCGTGAGTACCATGATGTTGTCACATTTGATGATAATACACAGAGGACTTTTGTTTTATGTCGCTTGATGAAAAAAGCCGAGATAAAAGGCGAAGAGGAAAATGATACAATGATGTGTGATGAAGGGGAGCCTAGCAGACAAATGACACCCTCATTTCCTCCCATTCTTCATTATGTTGGATTCAGATTTTGTCCAACAGGTGAAGAGCTAGTTAATCACTACCTTAGAAATAAGTTGCTTGGTAATGACGCCATTGTAAACAATGTTATAGCTGAAGTTGATATTCGCAAGTTCGAACCATGGGAATTACCAGCTCGTTCGGTGATAAAATCTGATGACCAAGAATGGTTTTTCTTGTGCCCTATTGAATACAAGTATGCAAAGAGTAAAAGGTTTAAAAGGACAACTAATAATGGTTTTTGGAAAGCTACTGGAATGGACCGTAACATTAGGATTAGGGGTACCAATGAAGTTATTGGGATTAAGAAGACTCTTGTTTACCATGAGAATCATGTTCCTGGTGTTAAGACCAATTGGATCATTCATGAGTATCATGATGTCACCTTAGAGGATTCCCAGGTTTGTTTTGTTACATTAAGGTTTTAA 1014 0.3738 MTTSFSLIHDCLPVGFRFHPTDQELVNYYLRNKLLGNEEFVNNVIAEVDVFKFKPWDLPAHSVIRSDDSEWFFLCPRNYKYQRCNKFKRGTEFGFWKATGKDHSVKIRGTDEVIGTKKTLVYYLAPHPGVKTNWVIREYHDVVTFDDNTQRTFVLCRLMKKAEIKGEEENDTMMCDEGEPSRQMTPSFPPILHYVGFRFCPTGEELVNHYLRNKLLGNDAIVNNVIAEVDIRKFEPWELPARSVIKSDDQEWFFLCPIEYKYAKSKRFKRTTNNGFWKATGMDRNIRIRGTNEVIGIKKTLVYHENHVPGVKTNWIIHEYHDVTLEDSQVCFVTLRF* 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0724 337 SUPERFAMILY NAC domain 3 161 IPR036093 GO:0003677|GO:0006355
Mtr8g0724 337 Pfam No apical meristem (NAM) protein 13 140 IPR003441 GO:0003677|GO:0006355
Mtr8g0724 337 Pfam No apical meristem (NAM) protein 195 321 IPR003441 GO:0003677|GO:0006355
Mtr8g0724 337 ProSiteProfiles NAC domain profile. 12 161 IPR003441 GO:0003677|GO:0006355
Mtr8g0724 337 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 195 327 - -
Mtr8g0724 337 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 14 169 - -
Mtr8g0724 337 Gene3D NAC domain 21 165 IPR036093 GO:0003677|GO:0006355
Mtr8g0724 337 Gene3D NAC domain 202 331 IPR036093 GO:0003677|GO:0006355
Mtr8g0724 337 SUPERFAMILY NAC domain 187 326 IPR036093 GO:0003677|GO:0006355
Mtr8g0724 337 ProSiteProfiles NAC domain profile. 193 337 IPR003441 GO:0003677|GO:0006355
Mtr8g0724 337 PANTHER NAC DOMAIN CONTAINING PROTEIN 49 195 327 - -
Mtr8g0724 337 PANTHER NAC DOMAIN CONTAINING PROTEIN 49 14 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0724 Mtr-Chr8 8689556 8691496 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g0724 195 327 NAC Transcription Factor Family AT4G35580 55.224 6.17e-40 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mtr8g0724 NAM 2.2e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0724 - - mtr:MTR_8g023900 704.131
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g0724 8 8689556 8691496 Mtr8g0724 8 8689556 8691496 ECH